Started by an SCM change Obtained jenkins_tests/clubb_BFB_gfortran_test/Jenkinsfile from git https://github.com/larson-group/clubb.git ha:////4Cjittq30hkYZjMOAEpajcZR0V8yygtTgYIvukrI0KfJAAAAoh+LCAAAAAAAAP9tjTEOwjAQBM8BClpKHuFItIiK1krDC0x8GCfWnbEdkooX8TX+gCESFVvtrLSa5wtWKcKBo5UdUu8otU4GP9jS5Mixv3geZcdn2TIl9igbHBs2eJyx4YwwR1SwULBGaj0nRzbDRnX6rmuvydanHMu2V1A5c4MHCFXMWcf8hSnC9jqYxPTz/BXAFEIGsfuclm8zQVqFvQAAAA==[Pipeline] Start of Pipeline ha:////4OfoazyckbArggUo3ISfTGPxmxxRdP+stEFkv8dA98gsAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+KOrAycohUghExsUZZOEFIQkgb/d8mKe3EibgadyBQiQlLlmxL1nu+oE4RjhQdby12HpP2vA+jK4lPFLtroIm3dOGaMFGwXNpJkrGnpUrKFhaxClYC1hZ1oOTRZdiIVt1VExS65pxj2Q4CKm8GeAAThZxVzN8yR9jeRpMIf5y/AJj7DGxXvP/86jduZBmjwAAAAA==[Pipeline] node Running on ha:////4PqWFjfVpYLaXOXuBHWqEQC4WeD7FG24RNByvJrTw1n5AAAAmx+LCAAAAAAAAP9b85aBtbiIQTGjNKU4P08vOT+vOD8nVc83PyU1x6OyILUoJzMv2y+/JJUBAhiZGBgqihhk0NSjKDWzXb3RdlLBUSYGJk8GtpzUvPSSDB8G5tKinBIGIZ+sxLJE/ZzEvHT94JKizLx0a6BxUmjGOUNodHsLgAx2oBn6yfm5BaUlqUX6+WUga1P1AXf4U0vHAAAAoverlie in /home/jenkins/workspace/clubb_BFB_gfortran_test ha:////4FDlcnFr9e5989JzoK959XjJGyMMLx4dByuovsdbc3KZAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+KOrAycoh0gA0xsUZZOEFIQkgb/d8mKe3EibgadyBQiQlLlmxL1nu+oE4RjhQdby12HpP2vA+jK4lPFLtroIm3dOGaMFGwXNpJkrGnpUrKFhaxClYC1hZ1oOTRZdiIVt1VExS65pxj2Q4CKm8GeAAThZxVzN8yR9jeRpMIf5y/AJj7DGxXvP/86jfoP95RwAAAAA==[Pipeline] { ha:////4AE7Ft0kRt6yDHyl9I4e/bM1ttJPxUELiw6uNZ0QbR7MAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+KOrAycoh0gQkxsUZZOEFIQkgb/d8mKe3EibgadyBQiQlLlmxL1nu+oE4RjhQdby12HpP2vA+jK4lPFLtroIm3dOGaMFGwXNpJkrGnpUrKFhaxClYC1hZ1oOTRZdiIVt1VExS65pxj2Q4CKm8GeAAThZxVzN8yR9jeRpMIf5y/AJj7DGxXvP/86jc09154wAAAAA==[Pipeline] stage ha:////4FkD70+B6a5J0827ONeUqfTiQDpR4+VE+gWaygTpm9OWAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+KOrAycoh0ggUxsUZZOEFIQkgb/d8mKe3EibgadyBQiQlLlmxL1nu+oE4RjhQdby12HpP2vA+jK4lPFLtroIm3dOGaMFGwXNpJkrGnpUrKFhaxClYC1hZ1oOTRZdiIVt1VExS65pxj2Q4CKm8GeAAThZxVzN8yR9jeRpMIf5y/AJj7DGxXvP/86jek7ggRwAAAAA==[Pipeline] { (Declarative: Checkout SCM) ha:////4DWhhCSzqWCnqMgye1segLjeKHvm/Xy9xZ/t+WlCd57ZAAAAoh+LCAAAAAAAAP9tjTEOAiEURD9rLGwtPQTbaWGsbAmNJ0AWEZb8zwLrbuWJvJp3kLiJlZNMMm+a93rDOic4UbLcG+wdZu14DKOti0+U+lugiXu6ck2YKRguzSSpM+cFJRUDS1gDKwEbgzpQdmgLbIVXD9UGhba9lFS/o4DGdQM8gYlqLiqVL8wJdvexy4Q/z18BzLEA29ce4gfg7KmOvAAAAA==[Pipeline] checkout The recommended git tool is: git Fetching changes from the remote Git repository Cleaning workspace > git rev-parse --resolve-git-dir /home/jenkins/workspace/clubb_BFB_gfortran_test/.git # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -ffdx # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 0bb668e3a21dce9af466abc9f0e747fbb7b36eab (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Commit message: "QuadTune: Create 2 new plots." > git config core.sparsecheckout # timeout=10 > git checkout -f 0bb668e3a21dce9af466abc9f0e747fbb7b36eab # timeout=10 > git rev-list --no-walk 81fa0e3bef38ab4a734aa95e5f8b4dacb0776743 # timeout=10 ha:////4M0lBXi8L0O4N1wFY5lRb5LBLalDgJBC9nNrfR5OtcBNAAAAoh+LCAAAAAAAAP9tjTEOAiEURD9rLGwtPQTbGRNjZUtoPAGyiLDkfxZYdytP5NW8g8RNrJxkknnTvNcb1jnBiZLl3mDvMGvHYxhtXXyi1N8CTdzTlWvCTMFwaSZJnTkvKKkYWMIaWAnYGNSBskNbYCu8eqg2KLTtpaT6HQU0rhvgCUxUc1GpfGFOsLuPXSb8ef4KYI6xADvU7j9Dg2gqvAAAAA==[Pipeline] } ha:////4C9gVc/RMYuh4P3VFxhWoDv34M8ROVTApORMFM74AFZeAAAAoh+LCAAAAAAAAP9tjTEOAiEURD9rLGwtPQRbWRhjZUtoPAGyiLDkfxZYdytP5NW8g8RNrJxkknnTvNcb1jnBiZLl3mDvMGvHYxhtXXyi1N8CTdzTlWvCTMFwaSZJnTkvKKkYWMIaWAnYGNSBskNbYCu8eqg2KLTtpaT6HQU0rhvgCUxUc1GpfGFOsLuPXSb8ef4KYI6xADvU7j9J+wGOvAAAAA==[Pipeline] // stage ha:////4OMUaFGtWHpXHrnJEqNuTaTTH7zYW1TXuR1OOwesYqpuAAAAph+LCAAAAAAAAP9tjTEOwjAQBM9BKWgpeYQDEh2iorXc8AITG+PEugv2haTiRXyNPxCIRMVWOyut5vmCMic4UPKycdgGzHWQXez91ORAqb1EGmRDZ1kTZopOajdosu44oyZ2MEcUsFCwdFhHygE9w0o15m6qaNBXJ07TtldQBHuDBwg1mdkk/sKYYH3tbSb8ef4KYOwYxI6h2G4+x/INtuQqUcEAAAA=[Pipeline] withEnv ha:////4POBlF/w66TdRjLOMaZmbKoF4qlP3EsxWZ8MwJufSwVuAAAApR+LCAAAAAAAAP9tjTEOwjAUQ3+DOrAycoiUzoiJNerCCUITQtLo/zZJSSdOxNW4Ay2VmPBg2Zas93pDGQOcKBjuNHYWY2t570czJ54pdDdPmTu68pYwkte80bkhpc9rbShpWFUw2AjYamw9RYsmwU44+ZCVl2iqSwrzdhTArBrgCYWYyUmG9C1TgP19VJHwx/kLgKlPwOrDYvXyLD8BobDcwgAAAA==[Pipeline] { ha:////4CZMEuZltkWrpbK+PirOYQRSCqpH7y+OE712fANE7n/gAAAAph+LCAAAAAAAAP9tjTEOwjAUQ3+LOrAycohUZUVMrFEWThCaEJJG/7dJSjpxIq7GHWipxIQHy7ZkvdcbqhjgRMEwp7GzGFvLej+aObFMobt5yszRlbWEkbxmQmdBSp/XKihpWFWUsOGw1dh6ihZNgh138iFrL9HUlxTm7cihtGqAJxR8JicZ0rdMAfb3UUXCH+cvAKY+Qdk0ix2WZ/UBbwyqm8IAAAA=[Pipeline] stage ha:////4KUMCWFfscl/TOIZTM5EUNA/xqZlP8Dml1BjSoC8QS+sAAAAph+LCAAAAAAAAP9tjTEOwjAUQ3+LOrAycohUwIiYukZZOEFoQkgb/V9+UtqJE3E17kBLJSY8WLYl673eUESGE7ETjcXWY6y96ELvpiQG4vYaaBANXURNGClYoeygyNhqqYqShUVZDisJa4t1oOjRJdjIRj90GTS68px42o4Scm/u8IRMTuSkOX3LyLC99SYS/jh/ATB2CfLdfrbD/Cw+y7kUycIAAAA=[Pipeline] { (Update sys_admin Repo) ha:////4ANXFJd3P2uH6oG6fHcMxklx/Urd1yvPwqSjWMs4SBztAAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIiBB2iSmu54QUmNsaJdWdsh6TiRXyNPxCIRMUWq51t5vmCZYpw5GixNdQ5So3D4Hs7LRw4dhfPA7Z8xoYpsTcozSBZm3pGydnAnKKEhYCVocZzcmQzrEWr7qryimx1ynH6DgJKp2/wgEJM5qxi/sIYYXPtdWL6ef4KYAwZyu3uU/vwBgq0rvS+AAAA[Pipeline] sh + git -C /home/pub/jenkins_BFB_test_configs/sys_admin pull Already up to date. ha:////4HhaSfPPAiGCqYCWgOSOnTKEXCDVzERShhXph91HbicNAAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIihKgQVVrLDS8wsTFOrDtjOyQVL+Jr/IFAJCq2WO1sM88XLFOEI0eLraHOUWocBt/baeHAsbt4HrDlMzZMib1BaQbJ2tQzSs4G5hQlLASsDDWekyObYS1adVeVV2SrU47TdxBQOn2DBxRiMmcV8xfGCJtrrxPTz/NXAGMIGcrt/lO7N7BnLt++AAAA[Pipeline] } ha:////4FVL20V4kFZmoupJ3yD+ARu1qGTPdJik5rudocilzqMlAAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIiKGgQVVrLDS8wsTFOrDtjOyQVL+Jr/IFAJCq2WO1sM88XLFOEI0eLraHOUWocBt/baeHAsbt4HrDlMzZMib1BaQbJ2tQzSs4G5hQlLASsDDWekyObYS1adVeVV2SrU47TdxBQOn2DBxRiMmcV8xfGCJtrrxPTz/NXAGMIGcrt/lO7N4glvS6+AAAA[Pipeline] // stage ha:////4GMEqHjUfYXAoMs0hqFp6DevraMZMFu0DPhP4N7yQmvYAAAApx+LCAAAAAAAAP9tjTEOwjAUQ3+LOrAycohUnRgQE2uUhROEJoSk0f9tkpJOnIircQdaKjHhwbItWe/1hioGOFEwzGnsLMbWst6PZk4sU+hunjJzdGUtYSSvmdBZkNLntQpKGlYVJWw4bDW2nqJFk2DHnXzI2ks09SWFeTtyKK0a4AkFn8lJhvQtU4D9fVSR8Mf5C4CpT1A2zWKH5Vl9ANydZ8vCAAAA[Pipeline] stage ha:////4JQl56uZsMv+8JjlsYRZ9i8KX7vcTdAxCqZjHZrE7A7YAAAApx+LCAAAAAAAAP9tjTEOwjAUQ3+LOrAycohUTCAhpq5RFk4QmhDSRv+Xn5R24kRcjTvQUokJD5ZtyXqvNxSR4UTsRGOx9RhrL7rQuymJgbi9BhpEQxdRE0YKVig7KDK2WqqiZGFRlsNKwtpiHSh6dAk2stEPXQaNrjwnnrajhNybOzwhkxM5aU7fMjJsb72JhD/OXwCMXYJ8t5/tMD+LD0rlhNLCAAAA[Pipeline] { (Run Python Test) ha:////4CK4bwxOvxmA4DE5Mgve/HabCo+37fityp5hdwwJL6T6AAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOIiOhCiSmu54QUmNsaJdWdsh6TiRXyNPxCIRMUWq51t5vmCZYpw5GixNdQ5So3D4Hs7LRw4dhfPA7Z8xoYpsTcozSBZm3pGydnAnKKEhYCVocZzcmQzrEWr7qryimx1ynH6DgJKp2/wgEJM5qxi/sIYYXPtdWL6ef4KYAwZyu3uU/vwBr2eB0O+AAAA[Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load gcc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-rhucvef, netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by: mpich/4.2.1, hdf5/1.14.3-rhucvef, netcdf-c/4.9.2, netcdf-fortran/4.5.3) ------------------------------------------------------------------------------- Shell debugging restarted + unset __lmod_sh_dbg + return 0 + python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_gfortran_test_config =============================== Configuring Test =============================== Working directory set to: /home/jenkins/workspace/clubb_BFB_gfortran_test Checking specified repo: /home/jenkins/workspace/clubb_BFB_gfortran_test Using /home/jenkins/workspace/clubb_BFB_gfortran_test with origin https://github.com/larson-group/clubb.git Output Save Mode: none Using branch: master Making list from 'UnresolvedCommits': ================== WARNING ================== The baseline commit is the same as the final one. Nothing to do. Baseline Commit = ec720a8fe4132c9af37967fd3060080097b13182 Final Commit = ec720a8fe4132c9af37967fd3060080097b13182 =========================================== No remaining Unresolved Commits. System Exit detected. Calling test.cleanup() =============================== Cleanup =============================== Exiting with code: 0 ha:////4PBxYFW1qansOBRF8vjWk2A2+fKCYjrl9XqTZ8JM7D6+AAAApR+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOICVEgoFa3lhheYxBgn1l2wHZyKF/E1/oBFJCq2WO1sM683LIOHmr3BTlNvKTQWBzeavDCx76+OE3Z8wYYpsNModZLc6tOMkqOGOUUJCwErTY3jYMlEWItOPVTlFJnqHH3+jgJK297hCYXI5qh8/MLkYXMb28D08/wVwDQMEcr9Ntfu8AEWNdkpvgAAAA==[Pipeline] } ha:////4FTjaDN1tsiKbmkwo+u5WB7iWrd+XE+6/XnQiFvhcctHAAAApR+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPOKi0FAgqrRWGl5gYmOcWHfGdkgqXsTX+AMWkajYYrWzzbzesI4BThwM9poGS7Gz6N1o8sKJw3B1PGHPF+yYIjuNrZ5aVrpZsOWkYUlRwkrARlPnOFoyCbailw9ZOUmmOqeQv6OA0qo7PKEQ2ZxkSF+YA+xuo4pMP89fAczeJyj3da768AEi+zpyvgAAAA==[Pipeline] // stage ha:////4I/iKv7CmVvbBuwaBkJ522wVKMvAxCVU4CTw79jPYOAQAAAApB+LCAAAAAAAAP9tjTEOwjAQBC9BFLSUPMJR0iIqWisNLzCxMU6sO8e+kFS8iK/xBywiUbHFamebeb1hmyKcKFrRGxwcps6J4Cebl5gpDjdPs+jpKjrCRN6I1swtaXNesSU2sKYoYSNhZ7DzlBxahr3s1UNVXqGtLhzzd5RQOj3CEwqZzawif2GJcLhPOhH+PH8FsITAUDZNrrr+ALkszR2+AAAA[Pipeline] } ha:////4BMQrUXAlRoMDloQwb6I/Wcx3UB42CmJNwrxP1TeUijiAAAApB+LCAAAAAAAAP9tjTsOwjAQRDdBFLSUHGLDp0SpaC03nMAkxjixdoPt4FSciKtxBywiUTHFaN407/WGZfBQszfYaeothcbi4EaTFyb2/dVxwo4v2DAFdhqlTpJbfZpRctQwpyhhIWClqXEcLJkIa9Gph6qcIlOdo8/fUUBp2zs8oRDZHJWPX5g8bG5jG5h+nr8CmIYhQrk/5NptP4rPlqG+AAAA[Pipeline] // withEnv ha:////4C8WMLUT8piEoeSyb1Do3eviWH3g3Ez1fs/pdsFk+oMNAAAAox+LCAAAAAAAAP9tjbEOgjAURS8YB1dHP6Ikhs04uTYsfkGFWgvNe9g+hMkv8tf8B4kkTt7pnrOc1xvrFHHk6FRrqfOUaq/6MLj5qZFjdw08qpYvqmZKHKyq7FhxY08LViwWy7IcK42NpTpw8uQEW92ahymCIVecJc7uoJH75o4nMj2XxUT5whSxuw1NYvp1/gYw9b0g35eCrPwA6/9Rob0AAAA=[Pipeline] } ha:////4AQT/ujib4mxmGKK6dvAAgeVppX/OLXITxcGKkpL2pAZAAAAox+LCAAAAAAAAP9tjTEOwjAQBDdBFLSUPMKRQFSIitZKwwtMYowT6y7YF5KKF/E1/kBEJCq22plmXm8sU8SRo1ONpdZTqrzqQu+mpwaO7TXwoBq+qIopcbCqtEPJtT3NWLJYzMtyLDRWlqrAyZMTrHVjHqYIhlxxlji5g0bu6zueyPRUFhPlC2PE5tbXienX+RvA2HWCfLsXZLsP+ENVAr0AAAA=[Pipeline] // node ha:////4HGUtTqq1Q65sg1o6CT0QBmCkK32Wp/OksVCcLr914TbAAAAox+LCAAAAAAAAP9tjbEOgjAURS8YB1dHP6IkDC7GybVh8Qsq1Fpo3sP2IUx+kb/mP0gkcfJO95zlvN5Yp4gjR6daS52nVHvVh8HNT40cu2vgUbV8UTVT4mBVZceKG3tasGKxWJblWGlsLNWBkycn2OrWPEwRDLniLHF2B43cN3c8kem5LCbKF6aI3W1oEtOv8zeAqe8FebkXZOUHvgnyMr0AAAA=[Pipeline] End of Pipeline Finished: SUCCESS