Started by an SCM change461003b6cf728915e52cba23dc54bd3ae5ea9ee6364003b6cf728915e52cba23dc54bd3ae5ea9ee6364refs/remotes/origin/master003b6cf728915e52cba23dc54bd3ae5ea9ee6364003b6cf728915e52cba23dc54bd3ae5ea9ee6364refs/remotes/origin/master003b6cf728915e52cba23dc54bd3ae5ea9ee6364003b6cf728915e52cba23dc54bd3ae5ea9ee6364refs/remotes/origin/masterhttps://github.com/larson-group/clubb.githttp://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_BFB_e3sm_flags_gfortran_test/detail/clubb_BFB_e3sm_flags_gfortran_test/461/artifactshttp://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_BFB_e3sm_flags_gfortran_test/detail/clubb_BFB_e3sm_flags_gfortran_test/461/changeshttp://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_BFB_e3sm_flags_gfortran_test/detail/clubb_BFB_e3sm_flags_gfortran_test/461/http://carson.math.uwm.edu/jenkins/blue/organizations/jenkins/clubb_BFB_e3sm_flags_gfortran_test/detail/clubb_BFB_e3sm_flags_gfortran_test/461/testsfalsefalse#461760232560274clubb_BFB_e3sm_flags_gfortran_test #461461false46110306SUCCESS1747988167700http://carson.math.uwm.edu/jenkins/job/clubb_BFB_e3sm_flags_gfortran_test/461/src/generalized_grid_test.F90ab83782970ee2389c03e0b387abc35b6452418bc1747931098000http://carson.math.uwm.edu/jenkins/user/bmg2bmg2bmg2@uwm.eduI start adding some notes on grid generalization. 2025-05-22 11:24:58 -0500ab83782970ee2389c03e0b387abc35b6452418bcI start adding some notes on grid generalization.editsrc/generalized_grid_test.F90src/Benchmark_cases/atex.F90src/CLUBB_core/output_netcdf.F9001cd6d52d06689c704a7dc1b8239f1a6a82db2371747955296000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comfix precision error of reals 2025-05-22 18:08:16 -050001cd6d52d06689c704a7dc1b8239f1a6a82db237fix precision error of realseditsrc/Benchmark_cases/atex.F90editsrc/CLUBB_core/output_netcdf.F90src/CLUBB_core/remapping.F90src/CLUBB_core/grid_adaptation.F90src/CLUBB_core/remapping_module.F90src/CLUBB_core/grid_adaptation_module.F90f1798e4237187cb3f36a25c73293c27e6453b0eb1747962119000http://carson.math.uwm.edu/jenkins/user/0-freundlich-adenin0-freundlich-adenin0-freundlich-adenin@icloud.comrename grid_adaptation and remapping modules 2025-05-22 20:01:59 -0500f1798e4237187cb3f36a25c73293c27e6453b0ebrename grid_adaptation and remapping modulesaddsrc/CLUBB_core/grid_adaptation_module.F90deletesrc/CLUBB_core/grid_adaptation.F90deletesrc/CLUBB_core/remapping.F90addsrc/CLUBB_core/remapping_module.F90src/CLUBB_core/grid_adaptation_module.F90src/clubb_driver.F90003b6cf728915e52cba23dc54bd3ae5ea9ee63641747963509000http://carson.math.uwm.edu/jenkins/user/0-freundlich-adenin0-freundlich-adenin0-freundlich-adenin@icloud.comadd fix for grid generalization 2025-05-22 20:25:09 -0500003b6cf728915e52cba23dc54bd3ae5ea9ee6364add fix for grid generalizationeditsrc/CLUBB_core/grid_adaptation_module.F90editsrc/clubb_driver.F90githttp://carson.math.uwm.edu/jenkins/user/bmg2bmg2bmg2http://carson.math.uwm.edu/jenkins/user/0-freundlich-adenin0-freundlich-adenin0-freundlich-adeninhttp://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreplyfalseStarted by an SCM change462dd5f915658016e9a8b64128024eebaf4c7d24318dd5f915658016e9a8b64128024eebaf4c7d24318refs/remotes/origin/masterdd5f915658016e9a8b64128024eebaf4c7d24318dd5f915658016e9a8b64128024eebaf4c7d24318refs/remotes/origin/masterdd5f915658016e9a8b64128024eebaf4c7d24318dd5f915658016e9a8b64128024eebaf4c7d24318refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#462662996560274clubb_BFB_e3sm_flags_gfortran_test #462462false46210398SUCCESS1748074567030http://carson.math.uwm.edu/jenkins/job/clubb_BFB_e3sm_flags_gfortran_test/462/src/generalized_grid_test.F90dd5f915658016e9a8b64128024eebaf4c7d243181748024033000http://carson.math.uwm.edu/jenkins/user/bmg2bmg2bmg2@uwm.eduFinished my notes, documentation, and instructions for the generalized grid test. 2025-05-23 13:13:53 -0500dd5f915658016e9a8b64128024eebaf4c7d24318Finished my notes, documentation, and instructions for the generalizededitsrc/generalized_grid_test.F90githttp://carson.math.uwm.edu/jenkins/user/bmg2bmg2false463http://carson.math.uwm.edu/jenkins/job/clubb_BFB_e3sm_flags_gfortran_test/463/461http://carson.math.uwm.edu/jenkins/job/clubb_BFB_e3sm_flags_gfortran_test/461/Started by an SCM change46025d5bed515ab3d6e11e43419ef1fc3a71777e54525d5bed515ab3d6e11e43419ef1fc3a71777e545refs/remotes/origin/master25d5bed515ab3d6e11e43419ef1fc3a71777e54525d5bed515ab3d6e11e43419ef1fc3a71777e545refs/remotes/origin/master25d5bed515ab3d6e11e43419ef1fc3a71777e54525d5bed515ab3d6e11e43419ef1fc3a71777e545refs/remotes/origin/masterhttps://github.com/larson-group/clubb.gitfalse#460828107560274clubb_BFB_e3sm_flags_gfortran_test #460460false46010177SUCCESS1747901768956http://carson.math.uwm.edu/jenkins/job/clubb_BFB_e3sm_flags_gfortran_test/460/input/grid/dycore_e3sm.grdsrc/CLUBB_core/interpolation.F90input/grid/dycore.grdsrc/Benchmark_cases/atex.F90input/stats/all_stats.inpostprocessing/pyplotgen/src/ContourPanel.pysrc/CLUBB_core/grid_adaptation.F90src/CLUBB_core/stats_zm_module.F90src/CLUBB_core/constants_clubb.F90src/CLUBB_core/output_netcdf.F90src/CLUBB_core/model_flags.F90src/clubb_driver.F90postprocessing/grid_plot.pysrc/time_dependent_input.F90src/CLUBB_core/stats_clubb_utilities.F90postprocessing/create_grid_adaptation_plot.pysrc/CLUBB_core/remapping.F90input/grid/gr_min.grdsrc/CLUBB_core/stats_variables.F9025d5bed515ab3d6e11e43419ef1fc3a71777e5451747866722000http://carson.math.uwm.edu/jenkins/user/noreplynoreplynoreply@github.comMerge grid adaptation implementation (#1249) * add tunable parameter interp_from_dycore_grid_method * add dycore interpolation to atex case with conservative remapping by ullrich * remove new gpu commands * add acc annotation for gpu * remove acc annotation again * add acc annotation for parallel loop * add acc annotations for parallel loop execution * change remapping subroutine to take number of levels and levels as input instead of whole grid object * add more general functions to interpolate * add and refactor functions for remapping values given on zm levels * fix compiler errors and refactoring to stay under 100 chars per line * remove TODOs and used new interpolating function in interpolate_forcings * add functions for adaptive grid generation and grid density function normalization * add conservative ullrich remapping to cases with forcing time dependent inputs * add grid adaptation and flag * clean up and add warning for case when remapping from dycore flag cannot be used * some refactoring * add logical flag for dycore and renamed flags for dycore and grid adaptation * remove ifdefs * refactoring * add units * changed Lscale to inverse * add write to file for grid adaptation (still WIP) * clean up * change parameter for grid adaptation and add file and plot script for grid adaptation * add script for animation * add e3sm dycore grid * refactoring for efficiency * small fix for grid adapt plot script * add new grid adaptation method with prescribed minimum density profile * fix call to setup_grid * add gabls2 case * add refinement criterion and adaptation trigger * small fix and add minimum grid density profile to animation * add grid density to pyplots * add general refinement criteria for astex and gabls2 case (and arm) * update create_evenly_grid script * unfinished save * WIP: save progress * save working configuration * save working config without Lscale * save working config wo the use of Lscale * change call to map1_ppm to use correct iv parameter and order 4 * save code for results in thesis * add code for results * refactor remapping module for grid adaptation * add list of functions/subroutines to remapping module * adjust use statements * add model files for arm, astex and gabls2 * refactor grid_adaptation module * refactor and adjust tim stopping in clubb_driver * clean up * clean up * add grids * add scripts * add changes made to pyplotgen to generate plots for paper * add configurable model flags file that was used to obtain results * clean up and save tunable parameters file * fix error * fix error * add grid adapt output for debug level 2 * change dycore grid * add plot generation script for paper plots * add small changes * add normalization explaination plot to paper plots script * fix plot * clean up for stats output * add comment * fix use of clubb_at_least_debug_api * small deallocation fix * fix merge problems * revert changes made to test grid adaptation * revert tunable_parameters for Lscale * revert changes made to create plots for grid adaptation * add new line * add new line * revert changes * revert changes made to generate grid adaptation plots 2025-05-21 17:32:02 -050025d5bed515ab3d6e11e43419ef1fc3a71777e545Merge grid adaptation implementation (#1249)addinput/grid/dycore_e3sm.grdaddinput/grid/dycore.grdaddpostprocessing/create_grid_adaptation_plot.pyeditinput/stats/all_stats.ineditsrc/CLUBB_core/model_flags.F90addinput/grid/gr_min.grdeditsrc/time_dependent_input.F90editsrc/CLUBB_core/grid_adaptation.F90editsrc/CLUBB_core/stats_variables.F90editsrc/Benchmark_cases/atex.F90editsrc/clubb_driver.F90editsrc/CLUBB_core/stats_zm_module.F90editsrc/CLUBB_core/interpolation.F90addsrc/CLUBB_core/remapping.F90editsrc/CLUBB_core/constants_clubb.F90editsrc/CLUBB_core/stats_clubb_utilities.F90addpostprocessing/grid_plot.pyeditsrc/CLUBB_core/output_netcdf.F90editpostprocessing/pyplotgen/src/ContourPanel.pygithttp://carson.math.uwm.edu/jenkins/user/noreplynoreplyfalse461http://carson.math.uwm.edu/jenkins/job/clubb_BFB_e3sm_flags_gfortran_test/461/459http://carson.math.uwm.edu/jenkins/job/clubb_BFB_e3sm_flags_gfortran_test/459/