Started by an SCM change
Obtained jenkins_tests/cam_plot_scam_ifort/Jenkinsfile from git <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
<span class="pipeline-new-node" nodeId="2" startId="2">[Pipeline] Start of Pipeline
</span><span class="pipeline-new-node" nodeId="3" startId="3" enclosingId="2">[Pipeline] node
</span><span class="pipeline-node-3">Running on <a href='/jenkins/computer/(built-in)/' class='jenkins-table__link model-link model-link--float'>Jenkins</a> in /home/jenkins/workspace/cam_plot_scam_ifort
</span><span class="pipeline-new-node" nodeId="4" startId="4" enclosingId="3">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="5" startId="5" enclosingId="4">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="6" startId="6" enclosingId="5" label="Declarative: Checkout SCM">[Pipeline] { (Declarative: Checkout SCM)
</span><span class="pipeline-new-node" nodeId="7" enclosingId="6">[Pipeline] checkout
</span><span class="pipeline-node-7">The recommended git tool is: git
 &gt; git rev-parse --resolve-git-dir /home/jenkins/workspace/cam_plot_scam_ifort/.git # timeout=10
Fetching changes from the remote Git repository
 &gt; git config remote.origin.url <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> # timeout=10
Cleaning workspace
 &gt; git rev-parse --verify HEAD # timeout=10
Resetting working tree
 &gt; git reset --hard # timeout=10
 &gt; git clean -ffdx # timeout=10
Fetching upstream changes from <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.34.1'
 &gt; git fetch --tags --force --progress -- <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
 &gt; git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision fd8e6875fb2af8688784b390081a8e77f4429162 (refs/remotes/origin/clubb_silhs_devel)
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f fd8e6875fb2af8688784b390081a8e77f4429162 # timeout=10
Commit message: "Autoupdated CLUBB_core Commit 9bf49fa9793a4099bed172f4959966bc14990864 Author: bmg929 Date: Thu Oct 24 09:24:04 2024 -0500 I am making the loops for the wp3 ta term (using ADG1 PDF) symmetric. Prior to this, they ran from thermo levels 2 to nzt-2. This change makes them symmetric by running them from 2 to nzt-1. There are no degradations to the results as a result of this change. This change makes it easier to generalize CLUBB's grid for both ascending and descending grid directions. The results of this change are BIT_CHANGING."
 &gt; git rev-list --no-walk f6318d0b524cf667ef008f22ef15c3f4e2e10c34 # timeout=10
</span><span class="pipeline-new-node" nodeId="8" startId="6">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="9" startId="5">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="10" startId="10" enclosingId="4">[Pipeline] withEnv
</span><span class="pipeline-new-node" nodeId="11" startId="11" enclosingId="10">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="12" startId="12" enclosingId="11">[Pipeline] withEnv
</span><span class="pipeline-new-node" nodeId="13" startId="13" enclosingId="12">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="14" startId="14" enclosingId="13">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="15" startId="15" enclosingId="14" label="Checkout Externals and Copy Custom Files">[Pipeline] { (Checkout Externals and Copy Custom Files)
</span><span class="pipeline-new-node" nodeId="16" enclosingId="15">[Pipeline] sh
</span><span class="pipeline-node-16">+ python run_scripts/set_up_repo.py .
Checking out externals...
Copying ccs_config files
</span><span class="pipeline-new-node" nodeId="17" startId="15">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="18" startId="14">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="19" startId="19" enclosingId="13">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="20" startId="20" enclosingId="19" label="Sed Commands">[Pipeline] { (Sed Commands)
</span><span class="pipeline-new-node" nodeId="21" enclosingId="20">[Pipeline] sh
</span><span class="pipeline-node-21">+ sed -i 's/COMPILER=.*/COMPILER="intel"/g' run_scripts/run_scam.bash
</span><span class="pipeline-new-node" nodeId="22" enclosingId="20">[Pipeline] sh
</span><span class="pipeline-node-22">+ sed -i 's/DEBUG="TRUE"/DEBUG="FALSE"/g' run_scripts/run_scam.bash
</span><span class="pipeline-new-node" nodeId="23" startId="20">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="24" startId="19">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="25" startId="25" enclosingId="13">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="26" startId="26" enclosingId="25" label="Remove Old Output">[Pipeline] { (Remove Old Output)
</span><span class="pipeline-new-node" nodeId="27" enclosingId="26">[Pipeline] sh
</span><span class="pipeline-node-27">+ rm -rf /home/jenkins/cam_output/scratch/test_scam_ATEX /home/jenkins/cam_output/scratch/test_scam_ARM97
</span><span class="pipeline-new-node" nodeId="28" startId="28" enclosingId="26">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="29" startId="29" enclosingId="28">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="30" startId="29">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="31" startId="28">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="32" startId="26">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="33" startId="25">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="34" startId="34" enclosingId="13">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="35" startId="35" enclosingId="34" label="Run ATEX">[Pipeline] { (Run ATEX)
</span><span class="pipeline-new-node" nodeId="36" enclosingId="35">[Pipeline] sh
</span><span class="pipeline-node-36">+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ run_scripts/run_scam.bash ATEX
----- Case Setup -----
ERROR: Case directory /home/jenkins/workspace/cam_plot_scam_ifort/cime/scripts/test_scam_ATEX already exists
Error creating new case
</span><span class="pipeline-new-node" nodeId="37" startId="35">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="38" startId="34">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="39" startId="39" enclosingId="13">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="40" startId="40" enclosingId="39" label="Run ARM97 with SILHS">[Pipeline] { (Run ARM97 with SILHS)
</span>Stage "Run ARM97 with SILHS" skipped due to earlier failure(s)
<span class="pipeline-new-node" nodeId="41" enclosingId="40">[Pipeline] getContext
</span><span class="pipeline-new-node" nodeId="42" startId="40">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="43" startId="39">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="44" startId="44" enclosingId="13">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="45" startId="45" enclosingId="44" label="Compile and Run CLUBB">[Pipeline] { (Compile and Run CLUBB)
</span>Stage "Compile and Run CLUBB" skipped due to earlier failure(s)
<span class="pipeline-new-node" nodeId="46" enclosingId="45">[Pipeline] getContext
</span><span class="pipeline-new-node" nodeId="47" startId="45">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="48" startId="44">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="49" startId="49" enclosingId="13">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="50" startId="50" enclosingId="49" label="Plot">[Pipeline] { (Plot)
</span>Stage "Plot" skipped due to earlier failure(s)
<span class="pipeline-new-node" nodeId="51" enclosingId="50">[Pipeline] getContext
</span><span class="pipeline-new-node" nodeId="52" startId="50">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="53" startId="49">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="54" startId="54" enclosingId="13">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="55" startId="55" enclosingId="54" label="Declarative: Post Actions">[Pipeline] { (Declarative: Post Actions)
</span><span class="pipeline-new-node" nodeId="56" startId="56" enclosingId="55">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="57" startId="57" enclosingId="56">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="58" enclosingId="57">[Pipeline] sh
</span><span class="pipeline-node-58">+ chmod -R 755 /home/jenkins/cam_output/
</span><span class="pipeline-new-node" nodeId="59" enclosingId="57">[Pipeline] sh
</span><span class="pipeline-node-59">+ gzip -d '/home/jenkins/cam_output/scratch/test_scam_ATEX/bld/atm.bldlog.*.gz'
gzip: /home/jenkins/cam_output/scratch/test_scam_ATEX/bld/atm.bldlog.*.gz: No such file or directory
</span><span class="pipeline-new-node" nodeId="60" enclosingId="57">[Pipeline] echo
</span><span class="pipeline-node-60">Not all logs were made for ATEX.
</span><span class="pipeline-new-node" nodeId="61" enclosingId="57">[Pipeline] sh
</span><span class="pipeline-node-61">+ gzip -d '/home/jenkins/cam_output/scratch/test_scam_ARM97/bld/atm.bldlog.*.gz'
gzip: /home/jenkins/cam_output/scratch/test_scam_ARM97/bld/atm.bldlog.*.gz: No such file or directory
</span><span class="pipeline-new-node" nodeId="62" enclosingId="57">[Pipeline] echo
</span><span class="pipeline-node-62">Not all logs were made for ARM97.
</span><span class="pipeline-new-node" nodeId="63" startId="57">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="64" startId="56">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="65" startId="65" enclosingId="55">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="66" startId="66" enclosingId="65">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="67" startId="66">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="68" startId="65">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="69" startId="55">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="70" startId="54">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="71" startId="13">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="72" startId="12">[Pipeline] // withEnv
</span><span class="pipeline-new-node" nodeId="73" startId="11">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="74" startId="10">[Pipeline] // withEnv
</span><span class="pipeline-new-node" nodeId="75" startId="4">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="76" startId="3">[Pipeline] // node
</span><span class="pipeline-new-node" nodeId="77" startId="2">[Pipeline] End of Pipeline
</span>ERROR: script returned exit code 1
Finished: FAILURE