Started by user Gunther Huebler
Obtained jenkins_tests/cam_ne5_gpu_test/Jenkinsfile from git https://github.com/larson-group/cam.git
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/cam_ne5_gpu_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/cam.git
> git init /home/jenkins/workspace/cam_ne5_gpu_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/cam.git
> git --version # timeout=10
> git --version # 'git version 2.34.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
> git fetch --tags --force --progress -- https://github.com/larson-group/cam.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git config remote.origin.url https://github.com/larson-group/cam.git # timeout=10
> git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
> git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision 8a1dacc37c37fb79da3280ec122ee4eab22b1e54 (refs/remotes/origin/clubb_silhs_devel)
> git config core.sparsecheckout # timeout=10
> git checkout -f 8a1dacc37c37fb79da3280ec122ee4eab22b1e54 # timeout=10
Commit message: "Updating externals file to use newer ccs_config, and making a GPU ne5 runscript and accompanying jenkins test."
First time build. Skipping changelog.
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Externals and Copy Custom Files)
[Pipeline] sh
+ python run_scripts/set_up_cam_coarse_res.py .
Checking out externals...
Copying ccs_config files
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Remove Old Output)
[Pipeline] sh
+ rm -rf /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/ /home/jenkins/cam_output/caseroot/UWM_ne5_gpu_no_stats_nelson_nvhpc/
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Running ne5 with OpenACC)
[Pipeline] sh
+ run_scripts/run_cesm_uwm_coarse_res_gpu_no_silhs.sh
----- Case Setup -----
usage: create_newcase [-h] [-d] [-v] [-s] --case CASENAME --compset COMPSET
--res GRID [--machine MACHINE] [--compiler COMPILER]
[--multi-driver] [--ninst NINST] [--mpilib MPILIB]
[--project PROJECT] [--pecount PECOUNT]
[--user-mods-dirs [USER_MODS_DIRS ...]]
[--pesfile PESFILE] [--gridfile GRIDFILE]
[--workflow WORKFLOW] [--srcroot SRCROOT]
[--output-root OUTPUT_ROOT] [--run-unsupported]
[--walltime WALLTIME] [-q QUEUE]
[--handle-preexisting-dirs {a,r,u}] [-i INPUT_DIR]
[--driver {mct,nuopc}] [-n]
[--extra-machines-dir EXTRA_MACHINES_DIR]
[--case-group CASE_GROUP]
[--ngpus-per-node NGPUS_PER_NODE] [--gpu-type GPU_TYPE]
[--gpu-offload GPU_OFFLOAD]
create_newcase: error: unrecognized arguments:
run_scripts/run_cesm_uwm_coarse_res_gpu_no_silhs.sh: line 47: --run-unsupported: command not found
Error creating new case
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] cleanWs
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
[Pipeline] sh
+ chmod -R 755 /home/jenkins/cam_output/
[Pipeline] sh
+ gzip -d '/home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/atm.bldlog.*.gz'
gzip: /home/jenkins/cam_output/scratch/UWM_ne5_gpu_no_stats_nelson_nvhpc/bld/atm.bldlog.*.gz: No such file or directory
[Pipeline] echo
Not all logs were compressed, this indicates a failure.
[Pipeline] }
[Pipeline] // script
[Pipeline] script
[Pipeline] {
[Pipeline] emailext
Sending email to: messnermet@uwm.edu
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 1
Finished: FAILURE