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* Fixing code to comply with clubb standards and making standards check output a little nicer

* Fixing unused variable compiler errors

* Removing ifdef GFDL option

* A bit of cleanup

* Little GPU fix

* Making the threadprivate check part of the standards, little script improvements, and adding more code to the standards check and also fixing it

* Adding missed cmake files

* Improving various subroutine edits
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* Fixing code to comply with clubb standards and making standards check output a little nicer

* Fixing unused variable compiler errors

* Removing ifdef GFDL option

* A bit of cleanup

* Little GPU fix

* Making the threadprivate check part of the standards, little script improvements, and adding more code to the standards check and also fixing it

* Adding missed cmake files

* Improving various subroutine edits
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</comment><date>2026-04-06 17:28:59 -0500</date><id>2a35d01af2ca03bb95c4c1aaffa09f0f8c5c963f</id><msg>Remove blank line to trigger git update script</msg><path><editType>edit</editType><file>CMakeLists.txt</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>CMakeLists.txt</affectedPath><commitId>38d375249096b55e9e9bd95679d4f1fd9867ba28</commitId><timestamp>1775514734000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Add blank line to trigger git update scripts
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* Making matrix solve checks also trigger if l_implemented is true so that they always are done in CAM, regardless of debug level

* Reworking rcond flag in advance_windm

* Updating l_implemented flag comments

* Adding printouts to make clear where the NaN are (if any) in the soln vector.
</comment><date>2026-03-23 15:25:40 -0500</date><id>c0491ff97ed74b6fed914860b18bb16756a9c20c</id><msg>Little Fix (#1287)</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>matrix_solver_wrapper.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>numerical_check.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>edit</editType><file>grid_class.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>grid_adaptation_module.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>224</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/224/</url></nextBuild><previousBuild><number>222</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/222/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>222</buildNumber><marked><SHA1>bdd345cc0a92472c9e2c39673bae4b621266c13e</SHA1><branch><SHA1>bdd345cc0a92472c9e2c39673bae4b621266c13e</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>bdd345cc0a92472c9e2c39673bae4b621266c13e</SHA1><branch><SHA1>bdd345cc0a92472c9e2c39673bae4b621266c13e</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>bdd345cc0a92472c9e2c39673bae4b621266c13e</SHA1><branch><SHA1>bdd345cc0a92472c9e2c39673bae4b621266c13e</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#222</displayName><duration>2681252</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #222</fullDisplayName><id>222</id><keepLog>false</keepLog><number>222</number><queueId>2424</queueId><result>SUCCESS</result><timestamp>1774254427864</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/222/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>interpolation.F90</affectedPath><commitId>6b992b63fb2158639d35fe5861f2e490eb612038</commitId><timestamp>1774158992000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>GPUizing most of radiation code
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* Compartmentalizing radiation code a bit

* More compartmentalizing

* Pushing loop into bugsrad because it makes things cleaner

* Small loop pushes

* Little cleanup

* Moving soil_veg code

* GPU fix and a little cleanup

* Missed a file to commit

* Making work with old build system

* Need zeroing routines for set_case_initial_conditions

* Adding comment explaining why advance_soil_veg is being packaged with Radiation code now
</comment><date>2026-03-18 16:02:50 -0500</date><id>4c3e62ea9fb1455849859daf0fc91af3b6c12ffd</id><msg>Clubb radiation update (#1283)</msg><path><editType>edit</editType><file>numerical_check.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>stats_netcdf.F90</affectedPath><commitId>154d87c9d163c7ad898aabe42be5ba4484234d28</commitId><timestamp>1773872129000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Dash app improvements (#1280)

* Mainly dash app improvements, but also removing unused args from stats and improving run scripts

* Small update to ui in run tab

* Improvements to make plotting faster, fixing various bugs, making things more robust, and adding more run modification fields (out_dir/dt_main/etc)

* Adding les plotting capabilities, lots of tiny improvements

* Reverting run_bindiff_all.py

* Tiny quality of life improvements - fixing port conflict, opening in browser automatically, and defaulting to the run_tab instead of requiring a first click
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* G_unit_test / ADG1_w_closure fix. A recent commit (bff619bdb2836f83ac658be8b8c258d41aaa6e14) introduced a change to ADG1_ADG2_responder_params that caused an inconsistency in the pdf calculations that the G_unit tests picked up on. This corrects it, but is also BIT_CHANGING, since it changes the calculation slightly when wp2 is exactly tolerance.

* Adding test to ensure err_info is correctly set by adg1 routines when calling with bad inputs - also moving wp2 check to ADG1_w_closure because it makes more sense there
</comment><date>2026-03-17 22:28:06 -0500</date><id>e08890831c3c07606716b2b8f620ea1e9029a2c5</id><msg>ADG1_w_closure consistency fix (#1282)</msg><path><editType>edit</editType><file>adg1_adg2_3d_luhar_pdf.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>matrix_solver_wrapper.F90</affectedPath><affectedPath>lapack_wrap.F90</affectedPath><commitId>8c9f81a53ce52fb923adc0fe4e55278910ade1b6</commitId><timestamp>1773805495000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Fixing clubb_error_handling_gfortran_test (#1281)

* Fixing error test by making the code check for NaNs in all solver cases - before it was only checking in Lapack. Also making a python version of the test and updating jenkins script to use it.

* A little cleanup

* Adding more comments and making a little data structure for the tests
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* Adding multiprocesses to run_scm_all.py, making the GPU jenkins tests only use 1 thread though, otherwise the different processes will fight for GPU usage

* Making the if statement in ADG1_ADG2_responder_params use a strict inequality - this was causing numerical issues when fields were close to tolerance. This will be slightly BIT_CHANGING for most cases.

* Adding comments to run_scm_all.py and removing the if-case in ADG1_ADG2_responder_params in favor of an explicit error check

* Changing nprocs to nproc and updating jenkins tests
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* Setting our solvers to use the new LU solvers by default instead of Lapack. This is BIT_CHANGING, but not answer changing.

* Also changing default in code
</comment><date>2026-03-10 21:50:06 -0500</date><id>f1a6ede61b31f09344a7fab737df2120f404eb35</id><msg>New solvers by default (#1275) - BIT_CHANGING</msg><path><editType>edit</editType><file>model_flags.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>CMakeLists.txt</affectedPath><commitId>156f7a7e22961d15a051d3d9e795d62aa690a491</commitId><timestamp>1773317100000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Add blank line in order to trigger git updates (issue #848)
</comment><date>2026-03-12 07:05:00 -0500</date><id>156f7a7e22961d15a051d3d9e795d62aa690a491</id><msg>Add blank line in order to trigger git updates (issue #848)</msg><path><editType>edit</editType><file>CMakeLists.txt</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>calendar.F90</affectedPath><commitId>b955bcdba6946a04ddfecab05d875b093482cd49</commitId><timestamp>1773445654000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/hancock</absoluteUrl><fullName>Trevor Hancock</fullName></author><authorEmail>hancoct@uwm.edu</authorEmail><comment>Added blank line
</comment><date>2026-03-13 18:47:34 -0500</date><id>b955bcdba6946a04ddfecab05d875b093482cd49</id><msg>Added blank line</msg><path><editType>edit</editType><file>calendar.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>LY93_pdf.F90</affectedPath><commitId>6f52a8390ba9ec8ee637344cde3798e632fcbbe8</commitId><timestamp>1773453517000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Remove Id tag from LY93_pdf.F90 in order to trigger git update scripts

larson-group/sys_admin#848
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in order to trigger git update scripts.  larson-group/sys_admin#848
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Testing python scripts from crontab
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stats system  (#1270)

* Initial commit for the new stats system

* Adding helper scripts

* Fixes and another script

* Updates

* Improvements

* Fixed bug in all_stats.in

* Updates

* Adding dash app

* Updates, also including new dash app since I'm finding it quite useful

* Improvements/fixes and adding missing variable to all_stats.in

* Updates

* Moving wp2sclrp, wpsclrp2, wpsclrprtp, and wpsclrpthlp to the zt netcdf output file, since those are zt variables. Also adding a missing variable, rcm_in_cloud, to all_stats.in and correcting a missing comma bug. This is technically BIT_CHANGING because the variables are moving files, but the stored data is identical from 1:nzt - the nzm level just had garbage for those variables and is now gone.

* Updates

* Updates

* The big stats pull, only new stats remains now

* Some cleanup

* Lot's of core rework, new index caching system speeds things up

* Missed files

* Small improvements a bug fix to the grid remapped output

* Fixing up logic and ordering things a bit better

* Little improvements

* Cleanup and simplications to new stats core

* Little improvements, mostly to dash app

* Mostly cleanup

* Making GPU code work

* Making more scripts work

* Fixing line lengths

* Bug fixes

* Bug fixes

* Bug fixes

* Bug fixes

* Bug fixes and script updates

* Jenkins script update

* Jenkins script update

* Jenkins script update

* Jenkins script update

* Jenkins script update

* Jenkins script update

* Script update

* Script update

* Script update

* Script update

* Script update

* Script update

* Script update

* Test update

* Jenkins script update

* Test update

* Fixing bug

* Fixing bug

* Fixing up comments

* Small fixes

* Jenkins script update

* CMake update

* Little fix for cmake

* Jenkins script update

* Jenkins script updateS

* Cmake update

* Jenkins script update

* Jenkins script update

* Jenkins script updates

* Adding new stats input

* Small fixes

* Fixing old compile scripts

* Jenkins script updates

* Jenkins script updates

* Jenkins script updates

* Little fixes

* Little cmake fix

* Little jenkins fix

* Mono flux test update and _api renamings

* Small Jenkins fix

* Adding missing comments back

* Even more comments

* stats updates

* Even more comments

* Various small improvements

* Removing test statsd

* Adding some things back to _api and adding structure explaining comment in stats files.

* Many more comments

* Removing plan file

* Spelling fix
</comment><date>2026-02-17 21:54:40 -0600</date><id>ca2eb415b0b77bdc3831d6ada5249d7a2c332682</id><msg>New stats system  (#1270)</msg><path><editType>edit</editType><file>matrix_solver_wrapper.F90</file></path><path><editType>add</editType><file>stats_netcdf.F90</file></path><path><editType>delete</editType><file>stats_rad_zt_module.F90</file></path><path><editType>edit</editType><file>advance_helper_module.F90</file></path><path><editType>delete</editType><file>recl.inc</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>CMakeLists.txt</file></path><path><editType>delete</editType><file>stats_lh_sfc_module.F90</file></path><path><editType>edit</editType><file>sfc_varnce_module.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>delete</editType><file>input_reader.F90</file></path><path><editType>delete</editType><file>stats_zt_module.F90</file></path><path><editType>delete</editType><file>input_names.F90</file></path><path><editType>delete</editType><file>stats_rad_zm_module.F90</file></path><path><editType>delete</editType><file>stats_type_utilities.F90</file></path><path><editType>delete</editType><file>stats_lh_zt_module.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>delete</editType><file>stats_zm_module.F90</file></path><path><editType>edit</editType><file>corr_varnce_module.F90</file></path><path><editType>edit</editType><file>precipitation_fraction.F90</file></path><path><editType>edit</editType><file>clip_explicit.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>edit</editType><file>numerical_check.F90</file></path><path><editType>edit</editType><file>advance_xp3_module.F90</file></path><path><editType>edit</editType><file>interpolation.F90</file></path><path><editType>delete</editType><file>output_netcdf.F90</file></path><path><editType>delete</editType><file>stat_file_module.F90</file></path><path><editType>delete</editType><file>output_grads.F90</file></path><path><editType>delete</editType><file>stats_sfc_module.F90</file></path><path><editType>delete</editType><file>stats_variables.F90</file></path><path><editType>edit</editType><file>setup_clubb_pdf_params.F90</file></path><path><editType>delete</editType><file>stats_type.F90</file></path><path><editType>edit</editType><file>fill_holes.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path><path><editType>edit</editType><file>remapping_module.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>silhs_api_module.F90</affectedPath><affectedPath>CMakeLists.txt</affectedPath><affectedPath>output_2D_samples_module.F90</affectedPath><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>00e0c2f5df3b257a5bd1125dbaefb99033b0b03e</commitId><timestamp>1771386880000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>New stats system  (#1270)

* Initial commit for the new stats system

* Adding helper scripts

* Fixes and another script

* Updates

* Improvements

* Fixed bug in all_stats.in

* Updates

* Adding dash app

* Updates, also including new dash app since I'm finding it quite useful

* Improvements/fixes and adding missing variable to all_stats.in

* Updates

* Moving wp2sclrp, wpsclrp2, wpsclrprtp, and wpsclrpthlp to the zt netcdf output file, since those are zt variables. Also adding a missing variable, rcm_in_cloud, to all_stats.in and correcting a missing comma bug. This is technically BIT_CHANGING because the variables are moving files, but the stored data is identical from 1:nzt - the nzm level just had garbage for those variables and is now gone.

* Updates

* Updates

* The big stats pull, only new stats remains now

* Some cleanup

* Lot's of core rework, new index caching system speeds things up

* Missed files

* Small improvements a bug fix to the grid remapped output

* Fixing up logic and ordering things a bit better

* Little improvements

* Cleanup and simplications to new stats core

* Little improvements, mostly to dash app

* Mostly cleanup

* Making GPU code work

* Making more scripts work

* Fixing line lengths

* Bug fixes

* Bug fixes

* Bug fixes

* Bug fixes

* Bug fixes and script updates

* Jenkins script update

* Jenkins script update

* Jenkins script update

* Jenkins script update

* Jenkins script update

* Jenkins script update

* Script update

* Script update

* Script update

* Script update

* Script update

* Script update

* Script update

* Test update

* Jenkins script update

* Test update

* Fixing bug

* Fixing bug

* Fixing up comments

* Small fixes

* Jenkins script update

* CMake update

* Little fix for cmake

* Jenkins script update

* Jenkins script updateS

* Cmake update

* Jenkins script update

* Jenkins script update

* Jenkins script updates

* Adding new stats input

* Small fixes

* Fixing old compile scripts

* Jenkins script updates

* Jenkins script updates

* Jenkins script updates

* Little fixes

* Little cmake fix

* Little jenkins fix

* Mono flux test update and _api renamings

* Small Jenkins fix

* Adding missing comments back

* Even more comments

* stats updates

* Even more comments

* Various small improvements

* Removing test statsd

* Adding some things back to _api and adding structure explaining comment in stats files.

* Many more comments

* Removing plan file

* Spelling fix
</comment><date>2026-02-17 21:54:40 -0600</date><id>00e0c2f5df3b257a5bd1125dbaefb99033b0b03e</id><msg>New stats system  (#1270)</msg><path><editType>delete</editType><file>output_2D_samples_module.F90</file></path><path><editType>edit</editType><file>silhs_api_module.F90</file></path><path><editType>edit</editType><file>CMakeLists.txt</file></path><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>stats_netcdf.F90</affectedPath><commitId>231830ece1c7fe859943f627e96d695d36742a8f</commitId><timestamp>1771388597000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Fixing fire tuner
</comment><date>2026-02-17 22:23:17 -0600</date><id>231830ece1c7fe859943f627e96d695d36742a8f</id><msg>Fixing fire tuner</msg><path><editType>edit</editType><file>stats_netcdf.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>run_scripts/run_cesm_uwm_coarse_res_r8029_flags.sh</affectedPath><affectedPath>src/physics/cam/subcol_SILHS.F90</affectedPath><affectedPath>run_scripts/netcdf_3D_vars_diff.py</affectedPath><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><affectedPath>run_scripts/run_scam.bash</affectedPath><affectedPath>bld/namelist_files/namelist_definition.xml</affectedPath><affectedPath>run_scripts/run_cesm_uwm.sh</affectedPath><affectedPath>run_scripts/run_cesm_uwm_coarse_res.sh</affectedPath><affectedPath>run_scripts/generate_clubb_stats_registry.py</affectedPath><affectedPath>run_scripts/all_stats.in</affectedPath><commitId>231228a130cc514a9762e976d83229ba1d77003c</commitId><timestamp>1771392368000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Update to make compatible with new stats.  (#214)

* Update to make compatible with new stats. This is BIT_CHANGING because it seems to fix some bugs - a few variables with unitialized output, and silhs stats output is now zeroed by the begin_timestep call, rather than just little the last timestep of data slip through as if it was the current timesteps data.

* Fixing missing _api

* Updating stats list to reflect new ordering and the size-&gt;nz change in stats_netcdf
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_class='hudson.plugins.git.GitChangeSet'><affectedPath>model_flags.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><affectedPath>constants_clubb.F90</affectedPath><affectedPath>numerical_check.F90</affectedPath><affectedPath>output_netcdf.F90</affectedPath><affectedPath>stats_variables.F90</affectedPath><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><affectedPath>grid_adaptation_module.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>stats_zt_module.F90</affectedPath><affectedPath>pdf_closure_module.F90</affectedPath><affectedPath>stats_clubb_utilities.F90</affectedPath><affectedPath>stats_zm_module.F90</affectedPath><commitId>7a1bb756cf4c4937e3ed2f2f431666919e52834f</commitId><timestamp>1767903824000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Non trad coriolis (#1267)

* Updating the clubb core and silhs version files

* Fixing bug. qclvar copying is handled by the api, but we were deleting it with an unstructured data statement. I added this due as a fix before thinking qclvar was a local variable, which happened because I mixed up the CLUBB_CAM and CLUBBND_CAM flags. https://github.com/larson-group/cam/issues/175

* Fixing GPU bug. There is a vertical dependency with wpxp. This is what was breaking the ECT test, see larson-group/cam#175

* Moving pdf_params copying to copyin. This is the data structure that contains pointers, and these pointers will be different on the host and device, so it is bad in theory to copy the structure back to the CPU as it might overwrite cpu memory pointers with gpu memory pointers. In practice though I've seen no problems caused by this, I'm just making this commit preemptively, and it has already been tested with the ECT test.

* Moving PosInf to clubb_model_settings.F90

* Updating the clubb core and silhs version files

* Add flags for the Coriolis terms.

* Pass fcory from api module into advance module

* Implement the traditional Coriolis terms

* Implement the nontraditional Coriolis terms

* Add stats variables for the Coriolis terms

* Compute Coriolis parameters from namelist latitude

* Create the coriolis_test case

* Tune the coriolis_test case. However, oscillation frequency is too slow

* Correct a coefficient in Coriolis. "coriolis_test" matches analytical

* Update advance_clubb_core_module.F90

Rename fcory as fcor_y and add description

* Update advance_wp2_wp3_module.F90

Rename fcory as fcor_y and add description

* Update advance_xm_wpxp_module.F90

Rename fcory as fcor_y and add description

* Update advance_xp2_xpyp_module.F90

Rename fcory as fcor_y and add description

* Update clubb_api_module.F90

Rename fcory as fcor_y and add description

* Update spurious_source_test.F90

Rename fcory as fcor_y and add description

* Update clubb_driver.F90

Rename fcor as fcor_y and add description.
Also, add description for the coriolis_test

* Update generalized_grid_test.F90

Rename fcory as fcor_y and add description.

* Update coriolis_test_model.in

Add description for the Coriolis test case

* Stablize the cgils_s6 case with smaller time step

* Create the ekman case

* Tune the ekman case to match LES

* Compute wp2up with PDF and pass along with wp2thvp

* Implement the nontraditional Coriolis term for wp3

* Fine-tune parameters for the ekman case

* Create the atex_long case

* Retune ekman case with l_vary_convect_depth = .true.

* Fine-tune the atex_long case

* Add atex_long case to pyplotgen

* Fine-tune atex_long case with less radical changes

* Updating the clubb core and silhs version files

* Small bug fix in the wp2up flip and adding new files to the cmakelist

* Renmaing, moving some files, and reverting change to cgils_s6 timestep

* Adding new flags to flag test file

* Updating comment for fcor_y calculation explanation

* Removing accidentally added file

---------

Co-authored-by: pickett &lt;larsongroupgithub@gmail.com&gt;
Co-authored-by: Hing Ong &lt;hing.ong@anl.gov&gt;
Co-authored-by: Hing Ong &lt;36782452+HingOng@users.noreply.github.com&gt;
</comment><date>2026-01-08 14:23:44 -0600</date><id>7a1bb756cf4c4937e3ed2f2f431666919e52834f</id><msg>Non trad coriolis (#1267)</msg><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>model_flags.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>output_netcdf.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>stats_zm_module.F90</file></path><path><editType>edit</editType><file>constants_clubb.F90</file></path><path><editType>edit</editType><file>stats_variables.F90</file></path><path><editType>edit</editType><file>stats_zt_module.F90</file></path><path><editType>edit</editType><file>grid_adaptation_module.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>numerical_check.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>bld/namelist_files/namelist_definition.xml</affectedPath><affectedPath>bld/build-namelist</affectedPath><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><affectedPath>bld/namelist_files/namelist_defaults_cam.xml</affectedPath><commitId>e66e18d3220e298679e1c9ba43349068693d72b4</commitId><timestamp>1767904703000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Making changes needed for clubb's new non traditional coriolis update (#211)

* Making changes needed for clubb's new non traditional coriolis update

* Also adding namelist entries for new coriolis options

* Renaming fcorz to fcor_y
</comment><date>2026-01-08 14:38:23 -0600</date><id>e66e18d3220e298679e1c9ba43349068693d72b4</id><msg>Making changes needed for clubb's new non traditional coriolis update (#211)</msg><path><editType>edit</editType><file>bld/build-namelist</file></path><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path><path><editType>edit</editType><file>bld/namelist_files/namelist_definition.xml</file></path><path><editType>edit</editType><file>bld/namelist_files/namelist_defaults_cam.xml</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>bld/namelist_files/namelist_definition.xml</affectedPath><affectedPath>bld/build-namelist</affectedPath><affectedPath>bld/namelist_files/namelist_defaults_cam.xml</affectedPath><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>5e1b0fb6c44d8b1f12db713c058fefdd96b67606</commitId><timestamp>1767911701000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Forgot to rename variables, and also setting fcor and fcor_y to nonzero. Which should be BFB thanks to the l_implemented flag.
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* Fixing bugs in new hole fillers that caused error when ran in descending mode, the issue was that dz is negative in descending mode, so we need abs() around it when calculating the normalized mass. Also fixing a related bug in the way edsclr code calls the hole filler - it was not using the generalized bounds. Also removing the ifdef in favor of normal ifs

* Copying the rtm and thm values from arm_97_sounding.in to the edsclr_sounding file. This still allows arm_97 to catch the bugs we want it to.
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* Making new flag l_force_descending_solves that forces us to use descending solves. Having it true keeps results BFB between ascending and descending when using -O0.

* renaming test

* Moving flag

* test fix

* test fix

* test fix

* Removing iteration limit on script and adding test error

* Removing test error, it was correctly caught

* Adding max statement to aid in single precision runs and removing accidentally commited file.
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</comment><date>2025-12-03 01:33:20 -0600</date><id>419df6ef23f8775f6f3a83b6312f149d43062ffe</id><msg>BIT_CHANGING bug fix for the penta_lu solver, only BC when using penta_solve_method=2 (#1264)</msg><path><editType>edit</editType><file>penta_lu_solver.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>CMakeLists.txt</affectedPath><affectedPath>matrix_solver_wrapper.F90</affectedPath><affectedPath>penta_bicgstab_solver.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><commitId>c77842f6ac6d78f16c08aed2bfebfceaf2bbc2ad</commitId><timestamp>1764884961000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Bicgstab addition (#1261)

* Adding 'initial' bicgstab solver

* Currently working, lots of diagnostic code still present

* Pruning everything unneccesary, adding lots of comments, making names good.

* Adding jenkins test to plot results with different solvers

* jenkins script update

* jenkins script update

* jenkins script update

* jenkins script update

* jenkins script update

* jenkins script update

* jenkins script update

* Removing print statement

* Improved naming and comments

* Removing print statement

* A couple more comments.
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</comment><date>2025-11-23 13:06:28 -0600</date><id>a3ea9b9a79b5f611682560444ef4f818f3ece9f4</id><msg>Making update_xp2_mc work with either grid mode (#1263)</msg><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>fill_holes.F90</affectedPath><affectedPath>clip_explicit.F90</affectedPath><commitId>f73802233285a4f336aa8171515d8e62a1abcdf9</commitId><timestamp>1763952429000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Improving variable name
</comment><date>2025-11-23 20:47:09 -0600</date><id>f73802233285a4f336aa8171515d8e62a1abcdf9</id><msg>Improving variable name</msg><path><editType>edit</editType><file>clip_explicit.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>fill_holes.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>stats_clubb_utilities.F90</affectedPath><commitId>5fa665ee419fb2a849cb2534c372cabfcba5699f</commitId><timestamp>1763952752000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Small bug fix, but this is BIT_CHANGING because it affects stats output. Some zm fields (w_1_zm, w_2_zm, varnce_w_1_zm, varnce_w_2_zm, and mixt_frac_zm) were all nan in the netcdf output when l_call_pdf_closure_twice=.false., because those come from pdf_params_zm.
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* Adding little code bits to help explore fill_holes. This is just a diagnostic playground

* Improvements

* Maybe better algorithm?

* Improvements to the new fill holes

* Nice progress

* Small tweaks

* Mainly adding gptl option for cmake and new run_timestep_tests.py

* Making namelist input for fill type, and adding ANOTHER new filler that should be completely parallelizable, but right now large hole groups steal too much from nearby points and it looks kinda bad.

* Big improvements, new algorithm is good now

* Small updates

* Making new fill_holes_type flag for clubb_config_flags

* New hybrid filler

* Small fixes

* Changes, mainly for performance, also adding -gptl option to compile.py to make it use the gptl library

* Bunch of things

* Updates

* small fix

* Various cleanup and comments

* Small improvement to p_atomic

* Updates for speed mainly

* Small improvement to p_atomic

* Potential improvement to p_atomic

* Updates for speed mainly

* Updates to make G_unit fill holes test

* Improving new tests and making widening_windows and smart_window work in flipped grid mode

* All methods passing G_unit test, still need a little cleanup

* Slight comments update

* Cleanup

* Adding named constants for fill type

* Uncommentting source checks after compile

* Adding new file to old compile method

* Small fixes

* Small fixes

* Mainly comments

* Making G_unit test use the new python script and compiler method. Small bug fix too

* Little fixes
</comment><date>2025-11-13 19:00:40 -0600</date><id>8aa1a13718befffb2cd6506f57eef8991f152a01</id><msg>New fill_holes methods (#1262)</msg><path><editType>edit</editType><file>fill_holes.F90</file></path><path><editType>edit</editType><file>model_flags.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>add</editType><file>model_flags.mod</file></path><path><editType>edit</editType><file>output_netcdf.F90</file></path><path><editType>edit</editType><file>CMakeLists.txt</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>bld/namelist_files/namelist_definition.xml</affectedPath><affectedPath>bld/build-namelist</affectedPath><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><affectedPath>bld/namelist_files/namelist_defaults_cam.xml</affectedPath><commitId>de549bf257cb094273722e62d79a037d8b84e8d4</commitId><timestamp>1763082097000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Making compatible with new fill_holes update (#208)

* Making compatible with new version of clubb

* Adding fill_holes option to namelist

* Adding to last namelist file
</comment><date>2025-11-13 19:01:37 -0600</date><id>de549bf257cb094273722e62d79a037d8b84e8d4</id><msg>Making compatible with new fill_holes update (#208)</msg><path><editType>edit</editType><file>bld/build-namelist</file></path><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path><path><editType>edit</editType><file>bld/namelist_files/namelist_defaults_cam.xml</file></path><path><editType>edit</editType><file>bld/namelist_files/namelist_definition.xml</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>fill_holes.F90</affectedPath><commitId>6df93a7b24b982fe08a25e35472d2d618f5099e5</commitId><timestamp>1763105789000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Small bug fix in fill_holes_parallel on GPU
</comment><date>2025-11-14 01:36:29 -0600</date><id>6df93a7b24b982fe08a25e35472d2d618f5099e5</id><msg>Small bug fix in fill_holes_parallel on GPU</msg><path><editType>edit</editType><file>fill_holes.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></culprit><inProgress>false</inProgress><nextBuild><number>202</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/202/</url></nextBuild><previousBuild><number>200</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/200/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.model.Cause$UserIdCause'><shortDescription>Started by user Gunther Huebler</shortDescription><userId>huebler</userId><userName>Gunther Huebler</userName></cause></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>200</buildNumber><marked><SHA1>03ffdce62430d42792ba7bb52c729bb5c6712fa2</SHA1><branch><SHA1>03ffdce62430d42792ba7bb52c729bb5c6712fa2</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>03ffdce62430d42792ba7bb52c729bb5c6712fa2</SHA1><branch><SHA1>03ffdce62430d42792ba7bb52c729bb5c6712fa2</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>03ffdce62430d42792ba7bb52c729bb5c6712fa2</SHA1><branch><SHA1>03ffdce62430d42792ba7bb52c729bb5c6712fa2</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#200</displayName><duration>1835255</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #200</fullDisplayName><id>200</id><keepLog>false</keepLog><number>200</number><queueId>11704</queueId><result>SUCCESS</result><timestamp>1759719342369</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/200/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>model_flags.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><affectedPath>clip_explicit.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>numerical_check.F90</affectedPath><affectedPath>output_netcdf.F90</affectedPath><affectedPath>mt95.F90</affectedPath><affectedPath>pdf_parameter_module.F90</affectedPath><affectedPath>grid_class.F90</affectedPath><affectedPath>hydromet_pdf_parameter_module.F90</affectedPath><affectedPath>parameters_tunable.F90</affectedPath><affectedPath>CMakeLists.txt</affectedPath><affectedPath>advance_windm_edsclrm_module.F90</affectedPath><affectedPath>advance_helper_module.F90</affectedPath><affectedPath>mixing_length.F90</affectedPath><affectedPath>grid_adaptation_module.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>pdf_closure_module.F90</affectedPath><affectedPath>stats_clubb_utilities.F90</affectedPath><affectedPath>sfc_varnce_module.F90</affectedPath><affectedPath>parameters_model.F90</affectedPath><commitId>6061db38ecdeb1e2e7a5f50a1c0dfdb784e7a155</commitId><timestamp>1759715158000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb driver upgrades part2 (#1257)

* Initial commit. Breaking up clubb driver into sections. This should be bfb on everything, but this hasn't been checked well yet.

* Combining namelist read into case init, same stuff really

* Reorganizing many things, mainly in the pursuit of sectioning off code into groups like Microphys or Radiation

* Organizing clubb_driver. All cases still BFB.

* Mostly cosmetic improvements

* Small improvements, comments, making clubb_driver_test to ensure consistency functionality of new compartmentalized model run components

* Removing accidentally added files.

* Mostly breaking up structure initialization behavior, split into init_ and zero_ so that we don't have to allocate to reset.

* Doing away with clubb_model_settings and parameters_module in the spirit of consolidating functionality and spiting module variables.

* Missed some changes to commit, should've been included in previous commit

* Splitting up funcionality of setup_parameters. Now theres one part that calculates and another checks flag values.

* GPU code working, but not BFB yet

* GPU all BFB with mutliple columns, except gabls3, and driver test doesnt work (pass reinitialize, fails double timestep test)

* Turning off multi_column output for the new driver test

* Changes needed after rebase

* Name changes, comments, and threadprivate additions for parallel runs

* Adding variables to openacc data statements. Without this, the code crashes when using the GPU with l_godunov_upwind_xpyp_ta=.true.

* Modifying compiler configurations (mainly optimization level) in order to prepare for switching scipts and tests to cmake, specifically separating out this BIT_CHANGING commit from the rest

* thlm_ed and rtm_ed caused GPU errors since those variables were added to a acc loop, but never added to the acc data statement. This change makes it so they're only calculated on the CPU, since they are only used for stats, fixing the issue without adding the GPU memory footprint.

* Adding -Mstack_arrays to the nvfortran flags causes us to use more stack space, which means we need to allow processes to use more stack space (when using lots of columns, since that increases memory footprint). We do by using using 'ulimit BIGNUMBER'.

* Making old compiler script work with new file structure, also making Input_fields directory and library.

* Missed text_writer_lib

* Undoing Input_fields directory, it has too many depencencies currently, certainly can be simplified with argument lists.

* Adding library dependency

* Small changes to cmake list

* Adding openmp flag back to gfortran script, needed for jenkins test

* Making the init_inputfields get called for restarts too, because restart code call input_field code.

* Making pdf_implicit_coefs_terms conditional in generalized grid test

* Adding microphys directory to acc_to_omp script

* Renaming -iters option in run_scm.py to -max_iters

* Making run_scm_all.py and new driver test

* Test and script improvements

* Limiting iterations in jenkins test

* Name change

* adding ulimit

* name update

* jenkins script update

* jenkins script update

* jenkins script update

* jenkins script update

* jenkins script and run_scm_all.py update

* jenkins script update

* Turning calc_lmin_nu into calc_derrived_params, which is more general, and now calculates mixt_frac_max_mag

* Small improvement for GPU

* Small updates needed for host model integration

* Removing accidentally added file

* Small cleanup
</comment><date>2025-10-05 20:45:58 -0500</date><id>6061db38ecdeb1e2e7a5f50a1c0dfdb784e7a155</id><msg>Clubb driver upgrades part2 (#1257)</msg><path><editType>delete</editType><file>mt95.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>CMakeLists.txt</file></path><path><editType>edit</editType><file>sfc_varnce_module.F90</file></path><path><editType>edit</editType><file>clip_explicit.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path><path><editType>edit</editType><file>advance_helper_module.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>delete</editType><file>parameters_model.F90</file></path><path><editType>edit</editType><file>grid_adaptation_module.F90</file></path><path><editType>edit</editType><file>output_netcdf.F90</file></path><path><editType>edit</editType><file>numerical_check.F90</file></path><path><editType>edit</editType><file>pdf_parameter_module.F90</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>grid_class.F90</file></path><path><editType>edit</editType><file>hydromet_pdf_parameter_module.F90</file></path><path><editType>edit</editType><file>model_flags.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>parameters_tunable.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>silhs_api_module.F90</affectedPath><affectedPath>mt95.F90</affectedPath><affectedPath>CMakeLists.txt</affectedPath><affectedPath>output_2D_samples_module.F90</affectedPath><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>65c0ff8e7f89aa0cf15f016d0bec345de92a4b1f</commitId><timestamp>1759715158000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb driver upgrades part2 (#1257)

* Initial commit. Breaking up clubb driver into sections. This should be bfb on everything, but this hasn't been checked well yet.

* Combining namelist read into case init, same stuff really

* Reorganizing many things, mainly in the pursuit of sectioning off code into groups like Microphys or Radiation

* Organizing clubb_driver. All cases still BFB.

* Mostly cosmetic improvements

* Small improvements, comments, making clubb_driver_test to ensure consistency functionality of new compartmentalized model run components

* Removing accidentally added files.

* Mostly breaking up structure initialization behavior, split into init_ and zero_ so that we don't have to allocate to reset.

* Doing away with clubb_model_settings and parameters_module in the spirit of consolidating functionality and spiting module variables.

* Missed some changes to commit, should've been included in previous commit

* Splitting up funcionality of setup_parameters. Now theres one part that calculates and another checks flag values.

* GPU code working, but not BFB yet

* GPU all BFB with mutliple columns, except gabls3, and driver test doesnt work (pass reinitialize, fails double timestep test)

* Turning off multi_column output for the new driver test

* Changes needed after rebase

* Name changes, comments, and threadprivate additions for parallel runs

* Adding variables to openacc data statements. Without this, the code crashes when using the GPU with l_godunov_upwind_xpyp_ta=.true.

* Modifying compiler configurations (mainly optimization level) in order to prepare for switching scipts and tests to cmake, specifically separating out this BIT_CHANGING commit from the rest

* thlm_ed and rtm_ed caused GPU errors since those variables were added to a acc loop, but never added to the acc data statement. This change makes it so they're only calculated on the CPU, since they are only used for stats, fixing the issue without adding the GPU memory footprint.

* Adding -Mstack_arrays to the nvfortran flags causes us to use more stack space, which means we need to allow processes to use more stack space (when using lots of columns, since that increases memory footprint). We do by using using 'ulimit BIGNUMBER'.

* Making old compiler script work with new file structure, also making Input_fields directory and library.

* Missed text_writer_lib

* Undoing Input_fields directory, it has too many depencencies currently, certainly can be simplified with argument lists.

* Adding library dependency

* Small changes to cmake list

* Adding openmp flag back to gfortran script, needed for jenkins test

* Making the init_inputfields get called for restarts too, because restart code call input_field code.

* Making pdf_implicit_coefs_terms conditional in generalized grid test

* Adding microphys directory to acc_to_omp script

* Renaming -iters option in run_scm.py to -max_iters

* Making run_scm_all.py and new driver test

* Test and script improvements

* Limiting iterations in jenkins test

* Name change

* adding ulimit

* name update

* jenkins script update

* jenkins script update

* jenkins script update

* jenkins script update

* jenkins script and run_scm_all.py update

* jenkins script update

* Turning calc_lmin_nu into calc_derrived_params, which is more general, and now calculates mixt_frac_max_mag

* Small improvement for GPU

* Small updates needed for host model integration

* Removing accidentally added file

* Small cleanup
</comment><date>2025-10-05 20:45:58 -0500</date><id>65c0ff8e7f89aa0cf15f016d0bec345de92a4b1f</id><msg>Clubb driver upgrades part2 (#1257)</msg><path><editType>edit</editType><file>silhs_api_module.F90</file></path><path><editType>edit</editType><file>output_2D_samples_module.F90</file></path><path><editType>add</editType><file>mt95.F90</file></path><path><editType>edit</editType><file>CMakeLists.txt</file></path><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><affectedPath>src/physics/cam/subcol_SILHS.F90</affectedPath><commitId>03ffdce62430d42792ba7bb52c729bb5c6712fa2</commitId><timestamp>1759719243000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Changes needed for compatibility with clubb_driver_upgrades_part2, from PR https://github.com/larson-group/clubb/pull/1257 (#204)

</comment><date>2025-10-05 21:54:03 -0500</date><id>03ffdce62430d42792ba7bb52c729bb5c6712fa2</id><msg>Changes needed for compatibility with clubb_driver_upgrades_part2, from PR https://github.com/larson-group/clubb/pull/1257 (#204)</msg><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path><path><editType>edit</editType><file>src/physics/cam/subcol_SILHS.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>201</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/201/</url></nextBuild><previousBuild><number>199</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/199/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>199</buildNumber><marked><SHA1>51174997cc51ad7841c74ab1821e139a9f39936d</SHA1><branch><SHA1>51174997cc51ad7841c74ab1821e139a9f39936d</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>51174997cc51ad7841c74ab1821e139a9f39936d</SHA1><branch><SHA1>51174997cc51ad7841c74ab1821e139a9f39936d</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>51174997cc51ad7841c74ab1821e139a9f39936d</SHA1><branch><SHA1>51174997cc51ad7841c74ab1821e139a9f39936d</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#199</displayName><duration>3094589</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #199</fullDisplayName><id>199</id><keepLog>false</keepLog><number>199</number><queueId>11552</queueId><result>SUCCESS</result><timestamp>1759480027861</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/199/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><commitId>406e74ef044da4c2383473bdffd74925641af924</commitId><timestamp>1759432819000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Adding variables to openacc data statements. Without this, the code crashes when using the GPU with l_godunov_upwind_xpyp_ta=.true.
</comment><date>2025-10-02 14:20:19 -0500</date><id>406e74ef044da4c2383473bdffd74925641af924</id><msg>Adding variables to openacc data statements. Without this, the code crashes when using the GPU with l_godunov_upwind_xpyp_ta=.true.</msg><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_clubb_core_module.F90</affectedPath><commitId>895048c969404beccab649c27f368c904175a9b4</commitId><timestamp>1759438529000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>thlm_ed and rtm_ed caused GPU errors since those variables were added to a acc loop, but never added to the acc data statement. This change makes it so they're only calculated on the CPU, since they are only used for stats, fixing the issue without adding the GPU memory footprint.
</comment><date>2025-10-02 15:55:29 -0500</date><id>895048c969404beccab649c27f368c904175a9b4</id><msg>thlm_ed and rtm_ed caused GPU errors since those variables were added to a acc loop, but never added to the acc data statement. This change makes it so they're only calculated on the CPU, since they are only used for stats, fixing the issue without adding the GPU memory footprint.</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_clubb_generalized_grid_scam_test/Jenkinsfile</affectedPath><affectedPath>run_scripts/run_generalized_grid_scam_test.bash</affectedPath><affectedPath>src/physics/cam/subcol_SILHS.F90</affectedPath><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>51174997cc51ad7841c74ab1821e139a9f39936d</commitId><timestamp>1759439203000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb intr revert (#203)

* Revert "I am officially setting l_ascending_grid to false in CAM-CLUBB, meaning"

This reverts commit 1644e80604055cf7a4910e9ace4213ac15f38fbf.

* Revert "Cam clubb silhs rev dir (#196)"

This reverts commit 5afa946afdb36ccab6009d735fd59a243a881f43.

This reverts a BIT_CHANGING commit, making this also BIT_CHANGING, see https://github.com/larson-group/cam/commit/1644e80604055cf7a4910e9ace4213ac15f38fbf
</comment><date>2025-10-02 16:06:43 -0500</date><id>51174997cc51ad7841c74ab1821e139a9f39936d</id><msg>Clubb intr revert (#203)</msg><path><editType>delete</editType><file>run_scripts/run_generalized_grid_scam_test.bash</file></path><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path><path><editType>edit</editType><file>src/physics/cam/subcol_SILHS.F90</file></path><path><editType>delete</editType><file>jenkins_tests/cam_clubb_generalized_grid_scam_test/Jenkinsfile</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></culprit><inProgress>false</inProgress><nextBuild><number>200</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/200/</url></nextBuild><previousBuild><number>198</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/198/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>198</buildNumber><marked><SHA1>32e7d4adf103e76b7fe05242a69588eb5a6fa296</SHA1><branch><SHA1>32e7d4adf103e76b7fe05242a69588eb5a6fa296</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>32e7d4adf103e76b7fe05242a69588eb5a6fa296</SHA1><branch><SHA1>32e7d4adf103e76b7fe05242a69588eb5a6fa296</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>32e7d4adf103e76b7fe05242a69588eb5a6fa296</SHA1><branch><SHA1>32e7d4adf103e76b7fe05242a69588eb5a6fa296</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#198</displayName><duration>2517534</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #198</fullDisplayName><id>198</id><keepLog>false</keepLog><number>198</number><queueId>11311</queueId><result>SUCCESS</result><timestamp>1759393627052</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/198/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>50f5a9aa2d2a1e4894e9d0aa40f653db463beb15</commitId><timestamp>1759358185000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Making the l_random_k_lh_start set the random generator seed before generating a random. This should fix the generalized grid test, which failed for the only flag set that turned on l_random_k_lh_start. Before, the test passed because we used the same random seed for all timesteps, preventing differences in the random call. But now we use a different seed each timestep, causing differences. To ensure reproducibility, we use the seed each timestep to generate rand_pool, which is an effective solution, but we need to do that for the rand_integer_in_range call in the l_random_k_lh_start code for the same reason. Since this does change the random that comes out, this is BIT_CHANGING, but only for runs using both SILHS and l_random_k_lh_start=.true.
</comment><date>2025-10-01 17:36:25 -0500</date><id>50f5a9aa2d2a1e4894e9d0aa40f653db463beb15</id><msg>Making the l_random_k_lh_start set the random generator seed before generating a random. This should fix the generalized grid test, which failed for the only flag set that turned on l_random_k_lh_start. Before, the test passed because we used the same random seed for all timesteps, preventing differences in the random call. But now we use a different seed each timestep, causing differences. To ensure reproducibility, we use the seed each timestep to generate rand_pool, which is an effective solution, but we need to do that for the rand_integer_in_range call in the l_random_k_lh_start code for the same reason. Since this does change the random that comes out, this is BIT_CHANGING, but only for runs using both SILHS and l_random_k_lh_start=.true.</msg><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></culprit><inProgress>false</inProgress><nextBuild><number>199</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/199/</url></nextBuild><previousBuild><number>197</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/197/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>197</buildNumber><marked><SHA1>1be51d053905fea48cebe2371a516e113a496312</SHA1><branch><SHA1>1be51d053905fea48cebe2371a516e113a496312</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>1be51d053905fea48cebe2371a516e113a496312</SHA1><branch><SHA1>1be51d053905fea48cebe2371a516e113a496312</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>1be51d053905fea48cebe2371a516e113a496312</SHA1><branch><SHA1>1be51d053905fea48cebe2371a516e113a496312</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#197</displayName><duration>2727664</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #197</fullDisplayName><id>197</id><keepLog>false</keepLog><number>197</number><queueId>11225</queueId><result>SUCCESS</result><timestamp>1759307226957</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/197/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>c65ac4caa14049aac533a666cae096b427ea4388</commitId><timestamp>1759289999000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>SILHS reproducibility (#1258)

* Making the SILHS random number generator on GPUs more reproducible by relying on the lh_seed input every call, which is the same as how the CPU randoms work. Also ensuring that the seed changes each timestep, just to prevent generating the same randoms on different timesteps. Since this does change the randoms, it is BIT_CHANGING for silhs enabled runs.

* Improving comment
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This fixes a problem with precip_frac exceeding a bound in single precision.  The code change is BIT_CHANGING for single precision, but V. Larson wouldn't expect it to be bit changing for double precision, although V. Larson hasn't checked.
</comment><date>2025-09-27 07:03:11 -0500</date><id>06d501ccaa052143c7142816c8a30b354593ff06</id><msg>Change tolerance in way that affects only single precision builds (#1256)</msg><path><editType>edit</editType><file>constants_clubb.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>197</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/197/</url></nextBuild><previousBuild><number>195</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/195/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>195</buildNumber><marked><SHA1>e94d063b32865a628aea8b86ae7a394883932653</SHA1><branch><SHA1>e94d063b32865a628aea8b86ae7a394883932653</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>e94d063b32865a628aea8b86ae7a394883932653</SHA1><branch><SHA1>e94d063b32865a628aea8b86ae7a394883932653</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>e94d063b32865a628aea8b86ae7a394883932653</SHA1><branch><SHA1>e94d063b32865a628aea8b86ae7a394883932653</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#195</displayName><duration>2584704</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #195</fullDisplayName><id>195</id><keepLog>false</keepLog><number>195</number><queueId>10993</queueId><result>SUCCESS</result><timestamp>1758961628640</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/195/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>grid_adaptation_module.F90</affectedPath><commitId>4660a606dd89b3b53da4c162f66d6571907d74ee</commitId><timestamp>1758908234000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Remove module vars from grid_adaptation_module (#1255)

* removed fixed_min_gr_dens module variables

* remove gr_dens_old_global variables

* remove counter and cumulative module variables
</comment><date>2025-09-26 19:37:14 +0200</date><id>4660a606dd89b3b53da4c162f66d6571907d74ee</id><msg>Remove module vars from grid_adaptation_module (#1255)</msg><path><editType>edit</editType><file>grid_adaptation_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>196</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/196/</url></nextBuild><previousBuild><number>194</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/194/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>194</buildNumber><marked><SHA1>e6a8375659be8bb0f6850a8d0170d5834dc51f20</SHA1><branch><SHA1>e6a8375659be8bb0f6850a8d0170d5834dc51f20</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>e6a8375659be8bb0f6850a8d0170d5834dc51f20</SHA1><branch><SHA1>e6a8375659be8bb0f6850a8d0170d5834dc51f20</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>e6a8375659be8bb0f6850a8d0170d5834dc51f20</SHA1><branch><SHA1>e6a8375659be8bb0f6850a8d0170d5834dc51f20</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#194</displayName><duration>2883859</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #194</fullDisplayName><id>194</id><keepLog>false</keepLog><number>194</number><queueId>10898</queueId><result>SUCCESS</result><timestamp>1758875228674</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/194/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>precipitation_fraction.F90</affectedPath><commitId>f68b263becf1bcfb48213729fd4ee43dac9d6780</commitId><timestamp>1758846454000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Precip frac fix (#1254)

* Using epsilon() to help check precip_frac against precip_frac_tol

* Using clubb version of eps for checks

Including BIT_CHANGING:06288ac66a3a26013c135d8aef776cc99202f64f because a ifort compiler option changed, and that changes the results. Otherwise it was all BFB.
</comment><date>2025-09-25 19:27:34 -0500</date><id>f68b263becf1bcfb48213729fd4ee43dac9d6780</id><msg>Precip frac fix (#1254)</msg><path><editType>edit</editType><file>precipitation_fraction.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>195</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/195/</url></nextBuild><previousBuild><number>193</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/193/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>193</buildNumber><marked><SHA1>31a990b91e4bb1507048326cb9b66eaa5de409a4</SHA1><branch><SHA1>31a990b91e4bb1507048326cb9b66eaa5de409a4</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>31a990b91e4bb1507048326cb9b66eaa5de409a4</SHA1><branch><SHA1>31a990b91e4bb1507048326cb9b66eaa5de409a4</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>31a990b91e4bb1507048326cb9b66eaa5de409a4</SHA1><branch><SHA1>31a990b91e4bb1507048326cb9b66eaa5de409a4</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#193</displayName><duration>2548344</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #193</fullDisplayName><id>193</id><keepLog>false</keepLog><number>193</number><queueId>10811</queueId><result>SUCCESS</result><timestamp>1758788828990</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/193/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>CMakeLists.txt</affectedPath><commitId>98d8c4814d6669dae533da157c1da701ec53e92c</commitId><timestamp>1758753854000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>The cmake update (#1253)

* Initial cmake additions

* Reworking dependency handling and toolchains.

* Improvements, intel, gfortran, and nvfortran work with and without debugging, and nvfortran works with openacc or openmp too.

* Small changes to toolchains

* Little various improvements

* Making ctests work

* Reworking ctests, we have decided to make the ctests run a small number of quick cases/tests just to facilitate development.

* Introducing ctests. Big script updates - run_scm.py and compile.py are new

* Introducing run_scm.py to replace run_scm.bash and CLUBBStandardsCheck.py to replace CLUBBStandardsCheck.pl. The new CLUBBStandardsCheck.py is much faster and should be even more capable at detecting issues than the perl version, it also has improved readability. The new run_scm.py is way more capable and managable than the bash version, it's used now in the new ctests. Also, the compile script has improved functionality, and ctests can be invoked when adding -run_tests to the compile.py call. Also the whole system supports maintaining builds with multiple compilers now, e.g. using nvfortran then ifx will not overwrite the nvfortran version now, and the new run_scm.py is smart enough to choose the right one depending on the compiler loaded.

* Small changes and adding a -legacy flag to run_scm.py to run the bin/clubb_standalone version from the excruciatingly old compilation system.

* Small cleanup and Cmake file simplifications - more to come

* Mostly cleanup. Moving stuff around to put it in better places, renaming, removing unnecessary parts, etc.

* More cleanup and adding comments

* Hopefully final cleanup

* Small bug fix

* Small changes and new jenkins test

* Small fix

* Now that our source checking scripts return error codes, we have to ignore them in this make file. This doesn't change their output at all, but causes the error code to be ignored

* Accidentally removed output dir

* Small fix to jenkins test

* Small fix to jenkins test

* Small fix to jenkins test

* Small fix to jenkins test

* Compile script improvements and new run_thread_test.py to replace bash version.

* Changing default ENABLE_OMP to default off, and changing the default executable used by the new python version of the thread test to use the cmake install by default.

* Making more general cmake test to test various compile options.

* Making ctests output better in compile.py and making new jenkins test a little fancier.

* Small fix to jenkins test

* Small fix to jenkins test

* Small fix to jenkins test

* Small fix to jenkins test

* Reverting some of the fancyness of new test

larson-group/clubb#1117
</comment><date>2025-09-24 17:44:14 -0500</date><id>98d8c4814d6669dae533da157c1da701ec53e92c</id><msg>The cmake update (#1253)</msg><path><editType>add</editType><file>CMakeLists.txt</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>CMakeLists.txt</affectedPath><commitId>3c612a8f18f66a849f81a234da6df214cd566720</commitId><timestamp>1758753854000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>The cmake update (#1253)

* Initial cmake additions

* Reworking dependency handling and toolchains.

* Improvements, intel, gfortran, and nvfortran work with and without debugging, and nvfortran works with openacc or openmp too.

* Small changes to toolchains

* Little various improvements

* Making ctests work

* Reworking ctests, we have decided to make the ctests run a small number of quick cases/tests just to facilitate development.

* Introducing ctests. Big script updates - run_scm.py and compile.py are new

* Introducing run_scm.py to replace run_scm.bash and CLUBBStandardsCheck.py to replace CLUBBStandardsCheck.pl. The new CLUBBStandardsCheck.py is much faster and should be even more capable at detecting issues than the perl version, it also has improved readability. The new run_scm.py is way more capable and managable than the bash version, it's used now in the new ctests. Also, the compile script has improved functionality, and ctests can be invoked when adding -run_tests to the compile.py call. Also the whole system supports maintaining builds with multiple compilers now, e.g. using nvfortran then ifx will not overwrite the nvfortran version now, and the new run_scm.py is smart enough to choose the right one depending on the compiler loaded.

* Small changes and adding a -legacy flag to run_scm.py to run the bin/clubb_standalone version from the excruciatingly old compilation system.

* Small cleanup and Cmake file simplifications - more to come

* Mostly cleanup. Moving stuff around to put it in better places, renaming, removing unnecessary parts, etc.

* More cleanup and adding comments

* Hopefully final cleanup

* Small bug fix

* Small changes and new jenkins test

* Small fix

* Now that our source checking scripts return error codes, we have to ignore them in this make file. This doesn't change their output at all, but causes the error code to be ignored

* Accidentally removed output dir

* Small fix to jenkins test

* Small fix to jenkins test

* Small fix to jenkins test

* Small fix to jenkins test

* Compile script improvements and new run_thread_test.py to replace bash version.

* Changing default ENABLE_OMP to default off, and changing the default executable used by the new python version of the thread test to use the cmake install by default.

* Making more general cmake test to test various compile options.

* Making ctests output better in compile.py and making new jenkins test a little fancier.

* Small fix to jenkins test

* Small fix to jenkins test

* Small fix to jenkins test

* Small fix to jenkins test

* Reverting some of the fancyness of new test

larson-group/clubb#1117
</comment><date>2025-09-24 17:44:14 -0500</date><id>3c612a8f18f66a849f81a234da6df214cd566720</id><msg>The cmake update (#1253)</msg><path><editType>add</editType><file>CMakeLists.txt</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>194</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/194/</url></nextBuild><previousBuild><number>192</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/192/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.model.Cause$UserIdCause'><shortDescription>Started by user Gunther Huebler</shortDescription><userId>huebler</userId><userName>Gunther Huebler</userName></cause></action><action 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_class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>stats_variables.F90</affectedPath><affectedPath>stats_zt_module.F90</affectedPath><commitId>123a31f755ebf9511f169f5fe1d6312c3b1cdc7a</commitId><timestamp>1758642876000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Adding expldiff budget terms for thlm and rtm (#1252)

* Adding expldiff budget terms for thlm and rtm

* Removing unintentional line.

* Fixing initialization-to-zero problem

* Adding some comments.

* Adding thlm_ed and rtm_ed to standard_stats.in

* Adding thlm_ed and rtm_ed to all_stats.in

* Fixing two bugs. Budget balance test passes and results are b4b.

This commit is BIT_CHANGING, but only because it adds additional
stats fields to the _zt.nc files. Answers would only change if
l_do_expldiff_rtm_thlm=T.
</comment><date>2025-09-23 09:54:36 -0600</date><id>123a31f755ebf9511f169f5fe1d6312c3b1cdc7a</id><msg>Adding expldiff budget terms for thlm and rtm (#1252)</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>stats_variables.F90</file></path><path><editType>edit</editType><file>stats_zt_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>192</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/192/</url></nextBuild><previousBuild><number>190</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/190/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.model.Cause$UserIdCause'><shortDescription>Started by user Brian Griffin</shortDescription><userId>griffinb</userId><userName>Brian Griffin</userName></cause></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>190</buildNumber><marked><SHA1>1644e80604055cf7a4910e9ace4213ac15f38fbf</SHA1><branch><SHA1>1644e80604055cf7a4910e9ace4213ac15f38fbf</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>1644e80604055cf7a4910e9ace4213ac15f38fbf</SHA1><branch><SHA1>1644e80604055cf7a4910e9ace4213ac15f38fbf</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>1644e80604055cf7a4910e9ace4213ac15f38fbf</SHA1><branch><SHA1>1644e80604055cf7a4910e9ace4213ac15f38fbf</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#190</displayName><duration>1456249</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #190</fullDisplayName><id>190</id><keepLog>false</keepLog><number>190</number><queueId>10372</queueId><result>SUCCESS</result><timestamp>1748038025879</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/190/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>1644e80604055cf7a4910e9ace4213ac15f38fbf</commitId><timestamp>1748037675000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>I am officially setting l_ascending_grid to false in CAM-CLUBB, meaning
that CLUBB's grid is now officially in descending mode in CAM, matching
CAM's grid direction.

With -O0 optimization and with CLUBB's l_test_grid_generalization turned
on, results are a bit-for-bit match to the previous revision.

However, normally CAM-CLUBB doesn't run with these options, which
means these results should be BIT_CHANGING.

This is probably my final commit to our battery of repositories.
Thank you for 23 years, and God bless you!
</comment><date>2025-05-23 17:01:15 -0500</date><id>1644e80604055cf7a4910e9ace4213ac15f38fbf</id><msg>I am officially setting l_ascending_grid to false in CAM-CLUBB, meaning</msg><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>191</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/191/</url></nextBuild><previousBuild><number>189</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/189/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>189</buildNumber><marked><SHA1>294f7921fa437e0b541244f89b96a679d039d4ba</SHA1><branch><SHA1>294f7921fa437e0b541244f89b96a679d039d4ba</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>294f7921fa437e0b541244f89b96a679d039d4ba</SHA1><branch><SHA1>294f7921fa437e0b541244f89b96a679d039d4ba</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>294f7921fa437e0b541244f89b96a679d039d4ba</SHA1><branch><SHA1>294f7921fa437e0b541244f89b96a679d039d4ba</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#189</displayName><duration>1970459</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #189</fullDisplayName><id>189</id><keepLog>false</keepLog><number>189</number><queueId>10326</queueId><result>SUCCESS</result><timestamp>1747988827777</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/189/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>output_netcdf.F90</affectedPath><commitId>177ee2016e7e4584f9c7c1d420ab3e1e01396960</commitId><timestamp>1747955296000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>fix precision error of reals
</comment><date>2025-05-22 18:08:16 -0500</date><id>177ee2016e7e4584f9c7c1d420ab3e1e01396960</id><msg>fix precision error of reals</msg><path><editType>edit</editType><file>output_netcdf.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>grid_adaptation_module.F90</affectedPath><affectedPath>grid_adaptation.F90</affectedPath><affectedPath>remapping.F90</affectedPath><affectedPath>remapping_module.F90</affectedPath><commitId>0ae10ffa778fe9951dfd3de81a1ffcd38b3e5bdd</commitId><timestamp>1747962119000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/0-freundlich-adenin</absoluteUrl><fullName>0-freundlich-adenin</fullName></author><authorEmail>0-freundlich-adenin@icloud.com</authorEmail><comment>rename grid_adaptation and remapping modules
</comment><date>2025-05-22 20:01:59 -0500</date><id>0ae10ffa778fe9951dfd3de81a1ffcd38b3e5bdd</id><msg>rename grid_adaptation and remapping modules</msg><path><editType>add</editType><file>grid_adaptation_module.F90</file></path><path><editType>add</editType><file>remapping_module.F90</file></path><path><editType>delete</editType><file>remapping.F90</file></path><path><editType>delete</editType><file>grid_adaptation.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>grid_adaptation_module.F90</affectedPath><commitId>3481c17db470604c208604778051bb11dfa7f943</commitId><timestamp>1747963509000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/0-freundlich-adenin</absoluteUrl><fullName>0-freundlich-adenin</fullName></author><authorEmail>0-freundlich-adenin@icloud.com</authorEmail><comment>add fix for grid generalization
</comment><date>2025-05-22 20:25:09 -0500</date><id>3481c17db470604c208604778051bb11dfa7f943</id><msg>add fix for grid generalization</msg><path><editType>edit</editType><file>grid_adaptation_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/0-freundlich-adenin</absoluteUrl><fullName>0-freundlich-adenin</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>190</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/190/</url></nextBuild><previousBuild><number>188</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/188/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.model.Cause$UserIdCause'><shortDescription>Started by user Brian Griffin</shortDescription><userId>griffinb</userId><userName>Brian Griffin</userName></cause></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>188</buildNumber><marked><SHA1>e5ec9afb7da53442bdee3952105faf142b9c3007</SHA1><branch><SHA1>e5ec9afb7da53442bdee3952105faf142b9c3007</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>e5ec9afb7da53442bdee3952105faf142b9c3007</SHA1><branch><SHA1>e5ec9afb7da53442bdee3952105faf142b9c3007</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>e5ec9afb7da53442bdee3952105faf142b9c3007</SHA1><branch><SHA1>e5ec9afb7da53442bdee3952105faf142b9c3007</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#188</displayName><duration>1344900</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #188</fullDisplayName><id>188</id><keepLog>false</keepLog><number>188</number><queueId>10278</queueId><result>SUCCESS</result><timestamp>1747962263452</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/188/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>f3e4feee74e7ead32bdc9e6373c1217b7dbb5e3c</commitId><timestamp>1747956100000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>I've got the magic fix
I know if I can fix it once, I can fix twice
I fix the baddest bugs ...

Changing the pbuf_get_field calls to only go from 1 to ncol in the
column dimension for the variables that are newly being passed
directly into advance_clubb_core_api thanks to our removal of
the _in variables (e.g. wp2_in) in a recent commit. This solves
the problem of trying to shove a (pverp-top_lev+1 x pcols) size
box into the hole for a (pverp-top_lev+1 x ncol) size box.

G-UNIT!!!
</comment><date>2025-05-22 18:21:40 -0500</date><id>f3e4feee74e7ead32bdc9e6373c1217b7dbb5e3c</id><msg>I've got the magic fix</msg><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>189</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/189/</url></nextBuild><previousBuild><number>187</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/187/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>187</buildNumber><marked><SHA1>151044a3d1ce02bfa4b602cd3f491b2878307dfa</SHA1><branch><SHA1>151044a3d1ce02bfa4b602cd3f491b2878307dfa</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>151044a3d1ce02bfa4b602cd3f491b2878307dfa</SHA1><branch><SHA1>151044a3d1ce02bfa4b602cd3f491b2878307dfa</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>151044a3d1ce02bfa4b602cd3f491b2878307dfa</SHA1><branch><SHA1>151044a3d1ce02bfa4b602cd3f491b2878307dfa</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#187</displayName><duration>1990430</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #187</fullDisplayName><id>187</id><keepLog>false</keepLog><number>187</number><queueId>10197</queueId><result>SUCCESS</result><timestamp>1747902429102</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/187/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>model_flags.F90</affectedPath><affectedPath>remapping.F90</affectedPath><affectedPath>constants_clubb.F90</affectedPath><affectedPath>output_netcdf.F90</affectedPath><affectedPath>stats_zm_module.F90</affectedPath><affectedPath>interpolation.F90</affectedPath><affectedPath>stats_variables.F90</affectedPath><affectedPath>stats_clubb_utilities.F90</affectedPath><affectedPath>grid_adaptation.F90</affectedPath><commitId>b558b034dae7a6c45872fe3f91ac6e163472eaaa</commitId><timestamp>1747866722000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Merge grid adaptation implementation (#1249)

* add tunable parameter interp_from_dycore_grid_method

* add dycore interpolation to atex case with conservative remapping by ullrich

* remove new gpu commands

* add acc annotation for gpu

* remove acc annotation again

* add acc annotation for parallel loop

* add acc annotations for parallel loop execution

* change remapping subroutine to take number of levels and levels as input instead of whole grid object

* add more general functions to interpolate

* add and refactor functions for remapping values given on zm levels

* fix compiler errors and refactoring to stay under 100 chars per line

* remove TODOs and used new interpolating function in interpolate_forcings

* add functions for adaptive grid generation and grid density function normalization

* add conservative ullrich remapping to cases with forcing time dependent inputs

* add grid adaptation and flag

* clean up and add warning for case when remapping from dycore flag cannot be used

* some refactoring

* add logical flag for dycore and renamed flags for dycore and grid adaptation

* remove ifdefs

* refactoring

* add units

* changed Lscale to inverse

* add write to file for grid adaptation (still WIP)

* clean up

* change parameter for grid adaptation and add file and plot script for grid adaptation

* add script for animation

* add e3sm dycore grid

* refactoring for efficiency

* small fix for grid adapt plot script

* add new grid adaptation method with prescribed minimum density profile

* fix call to setup_grid

* add gabls2 case

* add refinement criterion and adaptation trigger

* small fix and add minimum grid density profile to animation

* add grid density to pyplots

* add general refinement criteria for astex and gabls2 case (and arm)

* update create_evenly_grid script

* unfinished save

* WIP: save progress

* save working configuration

* save working config without Lscale

* save working config wo the use of Lscale

* change call to map1_ppm to use correct iv parameter and order 4

* save code for results in thesis

* add code for results

* refactor remapping module for grid adaptation

* add list of functions/subroutines to remapping module

* adjust use statements

* add model files for arm, astex and gabls2

* refactor grid_adaptation module

* refactor and adjust tim stopping in clubb_driver

* clean up

* clean up

* add grids

* add scripts

* add changes made to pyplotgen to generate plots for paper

* add configurable model flags file that was used to obtain results

* clean up and save tunable parameters file

* fix error

* fix error

* add grid adapt output for debug level 2

* change dycore grid

* add plot generation script for paper plots

* add small changes

* add normalization explaination plot to paper plots script

* fix plot

* clean up for stats output

* add comment

* fix use of clubb_at_least_debug_api

* small deallocation fix

* fix merge problems

* revert changes made to test grid adaptation

* revert tunable_parameters for Lscale

* revert changes made to create plots for grid adaptation

* add new line

* add new line

* revert changes

* revert changes made to generate grid adaptation plots
</comment><date>2025-05-21 17:32:02 -0500</date><id>b558b034dae7a6c45872fe3f91ac6e163472eaaa</id><msg>Merge grid adaptation implementation (#1249)</msg><path><editType>edit</editType><file>constants_clubb.F90</file></path><path><editType>edit</editType><file>stats_zm_module.F90</file></path><path><editType>edit</editType><file>interpolation.F90</file></path><path><editType>edit</editType><file>model_flags.F90</file></path><path><editType>edit</editType><file>output_netcdf.F90</file></path><path><editType>add</editType><file>remapping.F90</file></path><path><editType>edit</editType><file>stats_variables.F90</file></path><path><editType>edit</editType><file>grid_adaptation.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>188</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/188/</url></nextBuild><previousBuild><number>186</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/186/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>186</buildNumber><marked><SHA1>154fe0431dc356aebf5c39550a0b8c8a9b05e597</SHA1><branch><SHA1>154fe0431dc356aebf5c39550a0b8c8a9b05e597</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>154fe0431dc356aebf5c39550a0b8c8a9b05e597</SHA1><branch><SHA1>154fe0431dc356aebf5c39550a0b8c8a9b05e597</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>154fe0431dc356aebf5c39550a0b8c8a9b05e597</SHA1><branch><SHA1>154fe0431dc356aebf5c39550a0b8c8a9b05e597</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#186</displayName><duration>1487803</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #186</fullDisplayName><id>186</id><keepLog>false</keepLog><number>186</number><queueId>10104</queueId><result>SUCCESS</result><timestamp>1747816029709</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/186/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_xm_wpxp_module.F90</affectedPath><commitId>a1ccb74c23ed0ba31458eab3cd2101a82c39dcf3</commitId><timestamp>1747720486000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>zm and zt were mixed up in the error prints argument list.
</comment><date>2025-05-20 00:54:46 -0500</date><id>a1ccb74c23ed0ba31458eab3cd2101a82c39dcf3</id><msg>zm and zt were mixed up in the error prints argument list.</msg><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>187</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/187/</url></nextBuild><previousBuild><number>185</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/185/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.model.Cause$UserIdCause'><shortDescription>Started by user Gunther Huebler</shortDescription><userId>huebler</userId><userName>Gunther Huebler</userName></cause></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>185</buildNumber><marked><SHA1>0a7b056e7e3fb54e702de4e1ea97494a9fff85a9</SHA1><branch><SHA1>0a7b056e7e3fb54e702de4e1ea97494a9fff85a9</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>0a7b056e7e3fb54e702de4e1ea97494a9fff85a9</SHA1><branch><SHA1>0a7b056e7e3fb54e702de4e1ea97494a9fff85a9</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>0a7b056e7e3fb54e702de4e1ea97494a9fff85a9</SHA1><branch><SHA1>0a7b056e7e3fb54e702de4e1ea97494a9fff85a9</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#185</displayName><duration>1526826</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #185</fullDisplayName><id>185</id><keepLog>false</keepLog><number>185</number><queueId>10018</queueId><result>SUCCESS</result><timestamp>1747692442452</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/185/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>0a7b056e7e3fb54e702de4e1ea97494a9fff85a9</commitId><timestamp>1747689630000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Bug fix to dimensions that was causing crashes. This is technically BIT_CHANGING.
</comment><date>2025-05-19 16:20:30 -0500</date><id>0a7b056e7e3fb54e702de4e1ea97494a9fff85a9</id><msg>Bug fix to dimensions that was causing crashes. This is technically BIT_CHANGING.</msg><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></culprit><inProgress>false</inProgress><nextBuild><number>186</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/186/</url></nextBuild><previousBuild><number>184</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/184/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>184</buildNumber><marked><SHA1>5afa946afdb36ccab6009d735fd59a243a881f43</SHA1><branch><SHA1>5afa946afdb36ccab6009d735fd59a243a881f43</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>5afa946afdb36ccab6009d735fd59a243a881f43</SHA1><branch><SHA1>5afa946afdb36ccab6009d735fd59a243a881f43</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>5afa946afdb36ccab6009d735fd59a243a881f43</SHA1><branch><SHA1>5afa946afdb36ccab6009d735fd59a243a881f43</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#184</displayName><duration>1523724</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #184</fullDisplayName><id>184</id><keepLog>false</keepLog><number>184</number><queueId>9983</queueId><result>SUCCESS</result><timestamp>1747470428360</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/184/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_clubb_generalized_grid_scam_test/Jenkinsfile</affectedPath><affectedPath>src/physics/cam/subcol_SILHS.F90</affectedPath><affectedPath>run_scripts/run_generalized_grid_scam_test.bash</affectedPath><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>5afa946afdb36ccab6009d735fd59a243a881f43</commitId><timestamp>1747411956000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Cam clubb silhs rev dir (#196)

* Making updates to clubb_intr to reduce the vertical array sizes
of many CLUBB variables that are stored in pbuf.

* Updated clubb_intr.F90 and subcol_SILHS.F90 with some modifications
for generalized gridding.

* Fixed compilation bugs in clubb_intr.F90

* More modifications for generalized gridding

* Finished generalizing CLUBB and SILHS in CAM. A CAM-CLUBB run
comparing ascending vs. descending grids on -O0 optimization
now matches bit-for-bit for CLUBB and CLUBB-SILHS runs.

* Adding a new file to run a grid generalization test in CAM.

* Making run_generalized_grid_scam_test executable.

* Updated run_generalized_grid_scam_test.bash for further testing.

I also need to note that I love scam testing. It makes me feel like
I live in Nigeria!

* Added more to the run_generalized_grid_scam_test.bash script.

* Added more to the generalized grid test.

* Adding a Jenkinsfile for the CAM-CLUBB generalized grid scam test.
</comment><date>2025-05-16 11:12:36 -0500</date><id>5afa946afdb36ccab6009d735fd59a243a881f43</id><msg>Cam clubb silhs rev dir (#196)</msg><path><editType>add</editType><file>jenkins_tests/cam_clubb_generalized_grid_scam_test/Jenkinsfile</file></path><path><editType>edit</editType><file>src/physics/cam/subcol_SILHS.F90</file></path><path><editType>add</editType><file>run_scripts/run_generalized_grid_scam_test.bash</file></path><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>185</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/185/</url></nextBuild><previousBuild><number>183</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/183/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>183</buildNumber><marked><SHA1>4ac72071361c66baf68ee070e095e93d2204afe4</SHA1><branch><SHA1>4ac72071361c66baf68ee070e095e93d2204afe4</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>4ac72071361c66baf68ee070e095e93d2204afe4</SHA1><branch><SHA1>4ac72071361c66baf68ee070e095e93d2204afe4</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>4ac72071361c66baf68ee070e095e93d2204afe4</SHA1><branch><SHA1>4ac72071361c66baf68ee070e095e93d2204afe4</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#183</displayName><duration>1414855</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #183</fullDisplayName><id>183</id><keepLog>false</keepLog><number>183</number><queueId>9907</queueId><result>SUCCESS</result><timestamp>1747297630042</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/183/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>0d81cc17b85326cf37574349b2a8da9d24f08607</commitId><timestamp>1747236403000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Our little problem of having CLUBB's zm stats not match at boundaries
when compared between ascending and descending grids led me to discover
this bug in CAM-CLUBB stats zm output.
</comment><date>2025-05-14 10:26:43 -0500</date><id>0d81cc17b85326cf37574349b2a8da9d24f08607</id><msg>Our little problem of having CLUBB's zm stats not match at boundaries</msg><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_clubb_error_handling_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/cam_clubb_error_handling_test/cam_test_fatal_error_handling.bash</affectedPath><commitId>4ac72071361c66baf68ee070e095e93d2204afe4</commitId><timestamp>1747244912000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Cam clubb error handling jenkins test (#195)

* Fixed output for CAM CLUBB error handling Jenkins test
CLUBB ticket larson-group/clubb#975

* Eliminated the unnecessary command outputs from sh script in Jenkins
* Added more detailed output
</comment><date>2025-05-14 12:48:32 -0500</date><id>4ac72071361c66baf68ee070e095e93d2204afe4</id><msg>Cam clubb error handling jenkins test (#195)</msg><path><editType>edit</editType><file>jenkins_tests/cam_clubb_error_handling_test/Jenkinsfile</file></path><path><editType>edit</editType><file>jenkins_tests/cam_clubb_error_handling_test/cam_test_fatal_error_handling.bash</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>184</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/184/</url></nextBuild><previousBuild><number>182</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/182/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>182</buildNumber><marked><SHA1>ef17c4e116ce9f8b4c56caee26c37353bd20eaf9</SHA1><branch><SHA1>ef17c4e116ce9f8b4c56caee26c37353bd20eaf9</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>ef17c4e116ce9f8b4c56caee26c37353bd20eaf9</SHA1><branch><SHA1>ef17c4e116ce9f8b4c56caee26c37353bd20eaf9</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>ef17c4e116ce9f8b4c56caee26c37353bd20eaf9</SHA1><branch><SHA1>ef17c4e116ce9f8b4c56caee26c37353bd20eaf9</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#182</displayName><duration>1789288</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #182</fullDisplayName><id>182</id><keepLog>false</keepLog><number>182</number><queueId>9805</queueId><result>SUCCESS</result><timestamp>1747211230881</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/182/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>05da6cae754fce3ac98db08f8f5bd7595c5fc57a</commitId><timestamp>1747156038000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Update clubb_intr.F90

Replaced erroneously committed debug output with more evocative message.
</comment><date>2025-05-13 12:07:18 -0500</date><id>05da6cae754fce3ac98db08f8f5bd7595c5fc57a</id><msg>Update clubb_intr.F90</msg><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>calendar.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><affectedPath>clip_explicit.F90</affectedPath><affectedPath>stats_type_utilities.F90</affectedPath><affectedPath>diagnose_correlations_module.F90</affectedPath><affectedPath>grid_class.F90</affectedPath><affectedPath>setup_clubb_pdf_params.F90</affectedPath><affectedPath>advance_windm_edsclrm_module.F90</affectedPath><affectedPath>mono_flux_limiter.F90</affectedPath><affectedPath>mixing_length.F90</affectedPath><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><affectedPath>output_grads.F90</affectedPath><affectedPath>error_code.F90</affectedPath><affectedPath>pdf_closure_module.F90</affectedPath><affectedPath>matrix_solver_wrapper.F90</affectedPath><affectedPath>corr_varnce_module.F90</affectedPath><affectedPath>precipitation_fraction.F90</affectedPath><affectedPath>model_flags.F90</affectedPath><affectedPath>numerical_check.F90</affectedPath><affectedPath>pos_definite_module.F90</affectedPath><affectedPath>output_netcdf.F90</affectedPath><affectedPath>hydromet_pdf_parameter_module.F90</affectedPath><affectedPath>pdf_parameter_module.F90</affectedPath><affectedPath>sponge_layer_damping.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>lapack_wrap.F90</affectedPath><affectedPath>fill_holes.F90</affectedPath><affectedPath>interpolation.F90</affectedPath><affectedPath>stats_clubb_utilities.F90</affectedPath><affectedPath>grid_adaptation.F90</affectedPath><affectedPath>sfc_varnce_module.F90</affectedPath><affectedPath>matrix_operations.F90</affectedPath><commitId>49db55baddc842d93e891cf0e71e83357b25fa74</commitId><timestamp>1747158959000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Removed simple wrappers from clubb_api_module (#1245)

* Removed simple wrappers from clubb_api_module
CLUBB ticket #1223

Removed wrappers and renamed procedures in original modules:
- cleanup_clubb_core_api
- compute_current_date_api
- set_clubb_debug_level_api
- clubb_at_least_debug_level_api
- lin_interpolate_on_grid_api
- pack_pdf_params_api
- unpack_pdf_params_api
- init_precip_fracs_api
- init_pdf_implicit_coefs_terms_api
- stats_end_timestep_api
- print_clubb_config_flags_api
- initialize_tau_sponge_damp_api
- finalize_tau_sponge_damp_api
</comment><date>2025-05-13 12:55:59 -0500</date><id>49db55baddc842d93e891cf0e71e83357b25fa74</id><msg>Removed simple wrappers from clubb_api_module (#1245)</msg><path><editType>edit</editType><file>pos_definite_module.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>grid_adaptation.F90</file></path><path><editType>edit</editType><file>sfc_varnce_module.F90</file></path><path><editType>edit</editType><file>numerical_check.F90</file></path><path><editType>edit</editType><file>output_netcdf.F90</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>hydromet_pdf_parameter_module.F90</file></path><path><editType>edit</editType><file>output_grads.F90</file></path><path><editType>edit</editType><file>setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>calendar.F90</file></path><path><editType>edit</editType><file>corr_varnce_module.F90</file></path><path><editType>edit</editType><file>fill_holes.F90</file></path><path><editType>edit</editType><file>sponge_layer_damping.F90</file></path><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>stats_type_utilities.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path><path><editType>edit</editType><file>matrix_operations.F90</file></path><path><editType>edit</editType><file>grid_class.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>edit</editType><file>precipitation_fraction.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>pdf_parameter_module.F90</file></path><path><editType>edit</editType><file>interpolation.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>error_code.F90</file></path><path><editType>edit</editType><file>model_flags.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>diagnose_correlations_module.F90</file></path><path><editType>edit</editType><file>clip_explicit.F90</file></path><path><editType>edit</editType><file>matrix_solver_wrapper.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>lapack_wrap.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>latin_hypercube_driver_module.F90</affectedPath><affectedPath>silhs_importance_sample_module.F90</affectedPath><commitId>c7ab3b99994f99221fae7026adb974f302dc1393</commitId><timestamp>1747158959000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Removed simple wrappers from clubb_api_module (#1245)

* Removed simple wrappers from clubb_api_module
CLUBB ticket #1223

Removed wrappers and renamed procedures in original modules:
- cleanup_clubb_core_api
- compute_current_date_api
- set_clubb_debug_level_api
- clubb_at_least_debug_level_api
- lin_interpolate_on_grid_api
- pack_pdf_params_api
- unpack_pdf_params_api
- init_precip_fracs_api
- init_pdf_implicit_coefs_terms_api
- stats_end_timestep_api
- print_clubb_config_flags_api
- initialize_tau_sponge_damp_api
- finalize_tau_sponge_damp_api
</comment><date>2025-05-13 12:55:59 -0500</date><id>c7ab3b99994f99221fae7026adb974f302dc1393</id><msg>Removed simple wrappers from clubb_api_module (#1245)</msg><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path><path><editType>edit</editType><file>silhs_importance_sample_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>183</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/183/</url></nextBuild><previousBuild><number>181</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/181/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>181</buildNumber><marked><SHA1>ab8fae7439ce66431e0d473ed3ba29ef0d35d424</SHA1><branch><SHA1>ab8fae7439ce66431e0d473ed3ba29ef0d35d424</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>ab8fae7439ce66431e0d473ed3ba29ef0d35d424</SHA1><branch><SHA1>ab8fae7439ce66431e0d473ed3ba29ef0d35d424</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>ab8fae7439ce66431e0d473ed3ba29ef0d35d424</SHA1><branch><SHA1>ab8fae7439ce66431e0d473ed3ba29ef0d35d424</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#181</displayName><duration>1798205</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #181</fullDisplayName><id>181</id><keepLog>false</keepLog><number>181</number><queueId>9714</queueId><result>SUCCESS</result><timestamp>1747124826755</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/181/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/subcol_SILHS.F90</affectedPath><commitId>ab8fae7439ce66431e0d473ed3ba29ef0d35d424</commitId><timestamp>1747065263000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Using a CLUBB function to do a linear interpolation. It's possible that
this is BIT_CHANGING to round-off level.
</comment><date>2025-05-12 10:54:23 -0500</date><id>ab8fae7439ce66431e0d473ed3ba29ef0d35d424</id><msg>Using a CLUBB function to do a linear interpolation. It's possible that</msg><path><editType>edit</editType><file>src/physics/cam/subcol_SILHS.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>182</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/182/</url></nextBuild><previousBuild><number>180</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/180/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>180</buildNumber><marked><SHA1>e62129e81e7780b5ed522f4763ace6452a4040ce</SHA1><branch><SHA1>e62129e81e7780b5ed522f4763ace6452a4040ce</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>e62129e81e7780b5ed522f4763ace6452a4040ce</SHA1><branch><SHA1>e62129e81e7780b5ed522f4763ace6452a4040ce</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>e62129e81e7780b5ed522f4763ace6452a4040ce</SHA1><branch><SHA1>e62129e81e7780b5ed522f4763ace6452a4040ce</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#180</displayName><duration>2451893</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #180</fullDisplayName><id>180</id><keepLog>false</keepLog><number>180</number><queueId>9672</queueId><result>SUCCESS</result><timestamp>1746865630080</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/180/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_clubb_error_handling_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/cam_clubb_error_handling_test/cam_test_fatal_error_handling.bash</affectedPath><commitId>3c8451971af21fc8aac0c07f97a7b0babc2752d5</commitId><timestamp>1746812355000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Cam clubb error handling jenkins test (#194)

Wrote Jenkinsfile and bash script similar to CLUBB error handling test
</comment><date>2025-05-09 12:39:15 -0500</date><id>3c8451971af21fc8aac0c07f97a7b0babc2752d5</id><msg>Cam clubb error handling jenkins test (#194)</msg><path><editType>edit</editType><file>jenkins_tests/cam_clubb_error_handling_test/cam_test_fatal_error_handling.bash</file></path><path><editType>edit</editType><file>jenkins_tests/cam_clubb_error_handling_test/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>lapack_wrap.F90</affectedPath><commitId>e36dc57a454f0700084bf2b81de84ef6f10dbcb4</commitId><timestamp>1746812441000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Fixed and equalized NaN checks in lapack_wrap (#1246)

See CAM pull request larson-group/CAM#188

Added debug_level_at_least(0) checks where missing and changed debug_level(1) to 0 in lapack_band_solve,
so the new CAM CLUBB error handling test can do what it's supposed to do.
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Changed file permissions for jenkins_tests/cam_clubb_error_handling_test/cam_test_fatal_error_handling.bash so Jenkins can execute the script.
</comment><date>2025-05-07 10:47:16 -0500</date><id>bb9b49aa64decca39a8d6ff1f360ede01439aef3</id><msg>Cam clubb error handling jenkins test (#193)</msg><path><editType>edit</editType><file>jenkins_tests/cam_clubb_error_handling_test/cam_test_fatal_error_handling.bash</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>680ed4b0f4a48c4afc605d6185b27610abe6fc99</commitId><timestamp>1746644935000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Update clubb_intr.F90
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l_implemented flag blocks.
</comment><date>2025-05-06 11:34:23 -0500</date><id>a986aeb210058b3bb9be04880b99bc61ad2f26ec</id><msg>Cleaning up some grid generalization issues that were found within</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_clubb_error_handling_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/cam_clubb_error_handling_test/cam_test_fatal_error_handling.bash</affectedPath><commitId>acb7193331a00d6a06040b2c9e30c65e169b2b38</commitId><timestamp>1746563621000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Cam clubb error handling jenkins test (#191)

* Added CAM CLUBB error handling Jenkins test that is similar to the CLUBB error handling test

Wrote Jenkinsfile and bash script similar to CLUBB error handling test
</comment><date>2025-05-06 15:33:41 -0500</date><id>acb7193331a00d6a06040b2c9e30c65e169b2b38</id><msg>Cam clubb error handling jenkins test (#191)</msg><path><editType>add</editType><file>jenkins_tests/cam_clubb_error_handling_test/Jenkinsfile</file></path><path><editType>add</editType><file>jenkins_tests/cam_clubb_error_handling_test/cam_test_fatal_error_handling.bash</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_clubb_error_handling_test/Jenkinsfile</affectedPath><commitId>a13ae719e0e96bd34563b2584f4dd66210d27426</commitId><timestamp>1746564025000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Cam clubb error handling jenkins test (#192)

* Fixed braces error in Jenkinsfile
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Fixed error output for run?scm?all.bash, added some missing error checks to CLUBB
CLUBB ticket #975

* Fixed error output issues for run_scm_all.bash
- Changed tail $TMP_OUT to cat $TMP_OUT so we can see the entire stderr output of CLUBB in the log
- Added `if allocated` check to subroutine finalize_t_dependent_forcings in time_dependent_input.F90 to avoid runtime errors
- Removed unnecessary write statement in clubb_standalone.F90

* Added missing err_code checks
- Added err_code checks so we don't get false negative error messages
</comment><date>2025-05-02 12:37:23 -0500</date><id>ed8cf99696028a97975d3af4b3a83983857177da</id><msg>Run scm fixes (#1244)</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>grid_class.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>178</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/178/</url></nextBuild><previousBuild><number>176</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/176/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>176</buildNumber><marked><SHA1>ae2416d29975b1212cacac1947fc609c2840c1f2</SHA1><branch><SHA1>ae2416d29975b1212cacac1947fc609c2840c1f2</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>ae2416d29975b1212cacac1947fc609c2840c1f2</SHA1><branch><SHA1>ae2416d29975b1212cacac1947fc609c2840c1f2</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>ae2416d29975b1212cacac1947fc609c2840c1f2</SHA1><branch><SHA1>ae2416d29975b1212cacac1947fc609c2840c1f2</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#176</displayName><duration>2013387</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #176</fullDisplayName><id>176</id><keepLog>false</keepLog><number>176</number><queueId>9346</queueId><result>SUCCESS</result><timestamp>1746174428039</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/176/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>silhs_api_module.F90</affectedPath><affectedPath>parameters_silhs.F90</affectedPath><affectedPath>est_kessler_microphys_module.F90</affectedPath><affectedPath>lh_microphys_var_covar_module.F90</affectedPath><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>32a5fe09a9455802facfa6ffdf49d01fb4bc181f</commitId><timestamp>1746130418000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Removed renaming operators `=&gt;` and wrapper subroutines from silhs_api_module (#1240)

CLUBB ticket #1223
* Removed renaming operators `=&gt;` from silhs_api_module
This just affected latin_hypercube_2D_output_api and stats_accumulate_lh_api.

* Removed definitions of wrapper subroutines from silhs_api_module
Removed wrappers est_kessler_microphys_api, lh_microphys_var_covar_driver_api, set_default_silhs_config_flags_api, initialize_silhs_config_flags_type_api, print_silhs_config_flags_api, latin_hypercube_2D_close_api from silhs_api_module.
</comment><date>2025-05-01 15:13:38 -0500</date><id>32a5fe09a9455802facfa6ffdf49d01fb4bc181f</id><msg>Removed renaming operators `=&gt;` and wrapper subroutines from silhs_api_module (#1240)</msg><path><editType>edit</editType><file>lh_microphys_var_covar_module.F90</file></path><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path><path><editType>edit</editType><file>silhs_api_module.F90</file></path><path><editType>edit</editType><file>est_kessler_microphys_module.F90</file></path><path><editType>edit</editType><file>parameters_silhs.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>177</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/177/</url></nextBuild><previousBuild><number>175</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/175/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>175</buildNumber><marked><SHA1>a8cb33cde8895f6a21f218bb9fb7f8e120ce1861</SHA1><branch><SHA1>a8cb33cde8895f6a21f218bb9fb7f8e120ce1861</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>a8cb33cde8895f6a21f218bb9fb7f8e120ce1861</SHA1><branch><SHA1>a8cb33cde8895f6a21f218bb9fb7f8e120ce1861</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>a8cb33cde8895f6a21f218bb9fb7f8e120ce1861</SHA1><branch><SHA1>a8cb33cde8895f6a21f218bb9fb7f8e120ce1861</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#175</displayName><duration>1566165</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #175</fullDisplayName><id>175</id><keepLog>false</keepLog><number>175</number><queueId>9100</queueId><result>SUCCESS</result><timestamp>1745656029400</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/175/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>model_flags.F90</affectedPath><commitId>a58963f687a893aeaec62026a63bbe71dda262d4</commitId><timestamp>1745614161000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Running CLUBB with l_stability_correct_tau_zm = .true. now requires
setting l_damp_wp2_using_em to .false.  Thus, these two settings
now appear together in flag set 9. Since l_damp_wp2_using_em was
already set to .false. for flag set 11, I simply swapped flag sets
for l_damp_wp2_using_em = .false. (moved from flag set 11 to set 9)
and l_C2_cloud_frac = .true. (moved from flag set 9 to set 11).
</comment><date>2025-04-25 15:49:21 -0500</date><id>a58963f687a893aeaec62026a63bbe71dda262d4</id><msg>Running CLUBB with l_stability_correct_tau_zm = .true. now requires</msg><path><editType>edit</editType><file>model_flags.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>model_flags.F90</affectedPath><commitId>75c64ae1570a7534e37c51f33160b8a55358e38f</commitId><timestamp>1745614367000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>These changes were accidentally made during the previous commit. The are
being returned to their normal setting in this commit.
</comment><date>2025-04-25 15:52:47 -0500</date><id>75c64ae1570a7534e37c51f33160b8a55358e38f</id><msg>These changes were accidentally made during the previous commit. The are</msg><path><editType>edit</editType><file>model_flags.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>176</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/176/</url></nextBuild><previousBuild><number>174</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/174/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>174</buildNumber><marked><SHA1>77c7e76bb66f74d9e09bd859e09251c7519ba91d</SHA1><branch><SHA1>77c7e76bb66f74d9e09bd859e09251c7519ba91d</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>77c7e76bb66f74d9e09bd859e09251c7519ba91d</SHA1><branch><SHA1>77c7e76bb66f74d9e09bd859e09251c7519ba91d</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>77c7e76bb66f74d9e09bd859e09251c7519ba91d</SHA1><branch><SHA1>77c7e76bb66f74d9e09bd859e09251c7519ba91d</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#174</displayName><duration>2046765</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #174</fullDisplayName><id>174</id><keepLog>false</keepLog><number>174</number><queueId>9025</queueId><result>SUCCESS</result><timestamp>1745569630388</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/174/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><affectedPath>src/physics/cam/subcol_SILHS.F90</affectedPath><commitId>82bbae0f8003142f4a6d602156507f3665e4933b</commitId><timestamp>1745509041000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Updated CAM for err_info struct (#189)

Updated clubb_intr.F90 and subcol_SILHS.F90 for err_info struct, updated some of the error outputs.
</comment><date>2025-04-24 10:37:21 -0500</date><id>82bbae0f8003142f4a6d602156507f3665e4933b</id><msg>Updated CAM for err_info struct (#189)</msg><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path><path><editType>edit</editType><file>src/physics/cam/subcol_SILHS.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>mixing_length.F90</affectedPath><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><commitId>f922df0c8c9e9ed60d4ad8fe0368cc7479f480e6</commitId><timestamp>1745538547000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Err code gpu fix (#1241)

* GPU fix for new err_code system.

* Another small fix for OMP GPU code.
</comment><date>2025-04-24 18:49:07 -0500</date><id>f922df0c8c9e9ed60d4ad8fe0368cc7479f480e6</id><msg>Err code gpu fix (#1241)</msg><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>175</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/175/</url></nextBuild><previousBuild><number>173</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/173/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>173</buildNumber><marked><SHA1>f1bcc9737ecf48fe8bee867674559406165f572a</SHA1><branch><SHA1>f1bcc9737ecf48fe8bee867674559406165f572a</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>f1bcc9737ecf48fe8bee867674559406165f572a</SHA1><branch><SHA1>f1bcc9737ecf48fe8bee867674559406165f572a</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>f1bcc9737ecf48fe8bee867674559406165f572a</SHA1><branch><SHA1>f1bcc9737ecf48fe8bee867674559406165f572a</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#173</displayName><duration>1261025</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #173</fullDisplayName><id>173</id><keepLog>false</keepLog><number>173</number><queueId>8912</queueId><result>SUCCESS</result><timestamp>1745483226266</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/173/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>precipitation_fraction.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><affectedPath>numerical_check.F90</affectedPath><affectedPath>output_netcdf.F90</affectedPath><affectedPath>parameters_tunable.F90</affectedPath><affectedPath>grid_class.F90</affectedPath><affectedPath>setup_clubb_pdf_params.F90</affectedPath><affectedPath>advance_windm_edsclrm_module.F90</affectedPath><affectedPath>mono_flux_limiter.F90</affectedPath><affectedPath>mixing_length.F90</affectedPath><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><affectedPath>err_info_type_module.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>lapack_wrap.F90</affectedPath><affectedPath>pdf_closure_module.F90</affectedPath><affectedPath>stats_clubb_utilities.F90</affectedPath><affectedPath>grid_adaptation.F90</affectedPath><affectedPath>matrix_solver_wrapper.F90</affectedPath><affectedPath>sfc_varnce_module.F90</affectedPath><affectedPath>corr_varnce_module.F90</affectedPath><commitId>3d241e564776b535580a2b78d3f29fe1578676e6</commitId><timestamp>1745422568000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Err code struct (#1238)

Added err_info type to CLUBB to extend old err_code integer flag
CLUBB ticket #975

Created a new err_info type replacing the old err_code integer.
It contains MPI rank and (OMP) chunk index so we can identify the specific process that caused an error.
It also contains latitude and longitude so a person trying to debug a host model run can pinpoint the column that caused an error.
It contains error headers that combine all the info into a string that can be printed when an error happens.
And it comes with subroutines that handle initialization, value setting, and cleanup.

Host models will be modified accordingly.

Possible TODO: Implement a subroutine that identifies the index of the column with the error after the fact so we can have more specific info at the higher call levels by applying `where` to the err_code member array.
</comment><date>2025-04-23 10:36:08 -0500</date><id>3d241e564776b535580a2b78d3f29fe1578676e6</id><msg>Err code struct (#1238)</msg><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>edit</editType><file>grid_adaptation.F90</file></path><path><editType>edit</editType><file>parameters_tunable.F90</file></path><path><editType>edit</editType><file>sfc_varnce_module.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>corr_varnce_module.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>numerical_check.F90</file></path><path><editType>edit</editType><file>precipitation_fraction.F90</file></path><path><editType>edit</editType><file>output_netcdf.F90</file></path><path><editType>edit</editType><file>grid_class.F90</file></path><path><editType>edit</editType><file>matrix_solver_wrapper.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path><path><editType>add</editType><file>err_info_type_module.F90</file></path><path><editType>edit</editType><file>lapack_wrap.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>silhs_api_module.F90</affectedPath><affectedPath>latin_hypercube_driver_module.F90</affectedPath><affectedPath>output_2D_samples_module.F90</affectedPath><commitId>1a4c3cc982a84bba46f59cacdf819a7a4153153a</commitId><timestamp>1745422568000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Err code struct (#1238)

Added err_info type to CLUBB to extend old err_code integer flag
CLUBB ticket #975

Created a new err_info type replacing the old err_code integer.
It contains MPI rank and (OMP) chunk index so we can identify the specific process that caused an error.
It also contains latitude and longitude so a person trying to debug a host model run can pinpoint the column that caused an error.
It contains error headers that combine all the info into a string that can be printed when an error happens.
And it comes with subroutines that handle initialization, value setting, and cleanup.

Host models will be modified accordingly.

Possible TODO: Implement a subroutine that identifies the index of the column with the error after the fact so we can have more specific info at the higher call levels by applying `where` to the err_code member array.
</comment><date>2025-04-23 10:36:08 -0500</date><id>1a4c3cc982a84bba46f59cacdf819a7a4153153a</id><msg>Err code struct (#1238)</msg><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path><path><editType>edit</editType><file>silhs_api_module.F90</file></path><path><editType>edit</editType><file>output_2D_samples_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>174</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/174/</url></nextBuild><previousBuild><number>172</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/172/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause 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#172</fullDisplayName><id>172</id><keepLog>false</keepLog><number>172</number><queueId>8793</queueId><result>SUCCESS</result><timestamp>1745420768523</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/172/</url><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>173</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/173/</url></nextBuild><previousBuild><number>171</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/171/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>171</buildNumber><marked><SHA1>35b3ea889451c9a36beb1e305052ba99b0ec15e0</SHA1><branch><SHA1>35b3ea889451c9a36beb1e305052ba99b0ec15e0</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>35b3ea889451c9a36beb1e305052ba99b0ec15e0</SHA1><branch><SHA1>35b3ea889451c9a36beb1e305052ba99b0ec15e0</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>35b3ea889451c9a36beb1e305052ba99b0ec15e0</SHA1><branch><SHA1>35b3ea889451c9a36beb1e305052ba99b0ec15e0</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action _class='org.jenkinsci.plugins.workflow.cps.EnvActionImpl'></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#171</displayName><duration>737168</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #171</fullDisplayName><id>171</id><keepLog>false</keepLog><number>171</number><queueId>8755</queueId><result>FAILURE</result><timestamp>1745396827038</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/171/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>parameters_tunable.F90</affectedPath><commitId>38c8aa0c03693c9148f9468f2b4fa2026fe69fb9</commitId><timestamp>1745348257000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>I updated adj_low_res_nu for use with a generalized grid. It is
not called from within advance_clubb_core or from within SILHS.
It is not necessary to be generalized for tests within standalone
CLUBB. However, it is necessary to generalize this code for use
within host models, particularly for CAM and E3SM.
</comment><date>2025-04-22 13:57:37 -0500</date><id>38c8aa0c03693c9148f9468f2b4fa2026fe69fb9</id><msg>I updated adj_low_res_nu for use with a generalized grid. It is</msg><path><editType>edit</editType><file>parameters_tunable.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>172</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/172/</url></nextBuild><previousBuild><number>170</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/170/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>170</buildNumber><marked><SHA1>418af1b5ff11ae2a379e1c859956c5ac0a14e4fb</SHA1><branch><SHA1>418af1b5ff11ae2a379e1c859956c5ac0a14e4fb</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>418af1b5ff11ae2a379e1c859956c5ac0a14e4fb</SHA1><branch><SHA1>418af1b5ff11ae2a379e1c859956c5ac0a14e4fb</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>418af1b5ff11ae2a379e1c859956c5ac0a14e4fb</SHA1><branch><SHA1>418af1b5ff11ae2a379e1c859956c5ac0a14e4fb</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#170</displayName><duration>1589375</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #170</fullDisplayName><id>170</id><keepLog>false</keepLog><number>170</number><queueId>8625</queueId><result>SUCCESS</result><timestamp>1744273629823</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/170/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>precipitation_fraction.F90</affectedPath><affectedPath>setup_clubb_pdf_params.F90</affectedPath><commitId>55eae9b809c45299075475da2f488ecaac258a83</commitId><timestamp>1744204547000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb silhs gg (#1239)

* I added new subroutine pdf_hydromet_microphys_prep to encompass
the code that calls the hydrometeor PDF and then ultimately
handles the setup of SILHS sample points when SILHS is in use.

* Placeholder subroutine for SILHS grid generalization test.

* I have now connected the new subroutine to run_clubb. The results
for all cases match bit-for-bit to the previous revision.

* Cleaning up from the refactoring of the hydrometeor PDF and SILHS
code into a wrapper subroutine.

* I'm moving pdf_hydromet_microphys_prep to its own file to avoid
circular dependency once it finally needs to be called from the
generalized grid test code soon.

* Added some code to the SILHS generalized grid test.

* Changes to make this a fully functioning grid generalization test
for the part of the microphysics code that encompasses
setup_pdf_parameters and hydrometeor_mixed_moments.

* I have completed the code for the SILHS generalized grid test.

* I generalized precipitation fraction for ascending vs. descending grid.

* Fixing a bug that I noticed in the precipitation fraction calculation
when the component precip frac calculation was set to option 1
(which is currently not the default).

* The code should now be successfully grid-generalized for SILHS.
The ascending vs descending grid test should work now for all cases.

* Updating the core flags .json file to change some of the SILHS flags.

* I moved the call to advance_clubb_core_api (the default run option)
to the top of the "if" block, ahead of the grid generalization test
option that is now in the "else" block.

* Adding a new, hardwired constant flag called l_ascending_grid and
setting it to true in clubb_driver.F90.

* Keeping lines under 100 characters in length.

* Making it so the ascending vs. descending grid tests pass for the
l_lh_random_start flag.
</comment><date>2025-04-09 08:15:47 -0500</date><id>55eae9b809c45299075475da2f488ecaac258a83</id><msg>Clubb silhs gg (#1239)</msg><path><editType>edit</editType><file>precipitation_fraction.F90</file></path><path><editType>edit</editType><file>setup_clubb_pdf_params.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>silhs_api_module.F90</affectedPath><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>22f5d492241112ab03918dbd8041883b5b2ae28b</commitId><timestamp>1744204547000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb silhs gg (#1239)

* I added new subroutine pdf_hydromet_microphys_prep to encompass
the code that calls the hydrometeor PDF and then ultimately
handles the setup of SILHS sample points when SILHS is in use.

* Placeholder subroutine for SILHS grid generalization test.

* I have now connected the new subroutine to run_clubb. The results
for all cases match bit-for-bit to the previous revision.

* Cleaning up from the refactoring of the hydrometeor PDF and SILHS
code into a wrapper subroutine.

* I'm moving pdf_hydromet_microphys_prep to its own file to avoid
circular dependency once it finally needs to be called from the
generalized grid test code soon.

* Added some code to the SILHS generalized grid test.

* Changes to make this a fully functioning grid generalization test
for the part of the microphysics code that encompasses
setup_pdf_parameters and hydrometeor_mixed_moments.

* I have completed the code for the SILHS generalized grid test.

* I generalized precipitation fraction for ascending vs. descending grid.

* Fixing a bug that I noticed in the precipitation fraction calculation
when the component precip frac calculation was set to option 1
(which is currently not the default).

* The code should now be successfully grid-generalized for SILHS.
The ascending vs descending grid test should work now for all cases.

* Updating the core flags .json file to change some of the SILHS flags.

* I moved the call to advance_clubb_core_api (the default run option)
to the top of the "if" block, ahead of the grid generalization test
option that is now in the "else" block.

* Adding a new, hardwired constant flag called l_ascending_grid and
setting it to true in clubb_driver.F90.

* Keeping lines under 100 characters in length.

* Making it so the ascending vs. descending grid tests pass for the
l_lh_random_start flag.
</comment><date>2025-04-09 08:15:47 -0500</date><id>22f5d492241112ab03918dbd8041883b5b2ae28b</id><msg>Clubb silhs gg (#1239)</msg><path><editType>edit</editType><file>silhs_api_module.F90</file></path><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/subcol_SILHS.F90</affectedPath><commitId>4ee92ccfb630f3f8c3b56d986886b6b114d193b2</commitId><timestamp>1744205138000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Updating CAM-CLUBB for recent changes made to CLUBB-SILHS code.
</comment><date>2025-04-09 08:25:38 -0500</date><id>4ee92ccfb630f3f8c3b56d986886b6b114d193b2</id><msg>Updating CAM-CLUBB for recent changes made to CLUBB-SILHS code.</msg><path><editType>edit</editType><file>src/physics/cam/subcol_SILHS.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>171</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/171/</url></nextBuild><previousBuild><number>169</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/169/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>169</buildNumber><marked><SHA1>34f8c82cf0e8bcc0ffb84e75090e9397270582dc</SHA1><branch><SHA1>34f8c82cf0e8bcc0ffb84e75090e9397270582dc</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>34f8c82cf0e8bcc0ffb84e75090e9397270582dc</SHA1><branch><SHA1>34f8c82cf0e8bcc0ffb84e75090e9397270582dc</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>34f8c82cf0e8bcc0ffb84e75090e9397270582dc</SHA1><branch><SHA1>34f8c82cf0e8bcc0ffb84e75090e9397270582dc</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#169</displayName><duration>1866748</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #169</fullDisplayName><id>169</id><keepLog>false</keepLog><number>169</number><queueId>8454</queueId><result>SUCCESS</result><timestamp>1743150426278</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/169/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>stats_clubb_utilities.F90</affectedPath><commitId>92f350dce5f7be049b04ad3fbba532c4741c76c7</commitId><timestamp>1743109355000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb driver upgrades (#1225)

* Moving stuff around in preparation for preparation for GPUization

* Small modifications, adding explicit loops

* Small bug fix and explicit loop additions

* Removing ngrdcol dimension from initialize_clubb, essentially reverting changes.

* Removing array slicing by using local variables of nzm/nzt dim

* GPUization of initialization variables

* Removing need for single_col versions of the pdf_params, this (weirdly) saves a huge amount of runtime

* Adding comment

* Adding 2D version of various routines, including initialize_clubb, but only calling initialize_clubb with 1 column.

* Fixes to make work with latest clubb changes

* Merging with master
</comment><date>2025-03-27 16:02:35 -0500</date><id>92f350dce5f7be049b04ad3fbba532c4741c76c7</id><msg>Clubb driver upgrades (#1225)</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>170</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/170/</url></nextBuild><previousBuild><number>168</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/168/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>168</buildNumber><marked><SHA1>97aa2c69603ad8dd327196c2190dae80292aa917</SHA1><branch><SHA1>97aa2c69603ad8dd327196c2190dae80292aa917</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>97aa2c69603ad8dd327196c2190dae80292aa917</SHA1><branch><SHA1>97aa2c69603ad8dd327196c2190dae80292aa917</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>97aa2c69603ad8dd327196c2190dae80292aa917</SHA1><branch><SHA1>97aa2c69603ad8dd327196c2190dae80292aa917</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#168</displayName><duration>1453594</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #168</fullDisplayName><id>168</id><keepLog>false</keepLog><number>168</number><queueId>8259</queueId><result>SUCCESS</result><timestamp>1742804826553</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/168/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>interpolation.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><affectedPath>advance_windm_edsclrm_module.F90</affectedPath><commitId>685fa70650398309cae281d0306ed6437762caad</commitId><timestamp>1742704780000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb test correct gg (#1237)

* Updated the generalized vertical grid test to use the
run_bindiff_w_flags_config_core_flags.json file, which performs
18 overall flag configuration file tests and includes almost
every configurable model flag found in CLUBB core.

* Fixed a bug. This was caught by running the new hybrid PDF after
compiling with the gfortran debug compiler script.

* The CLUBB code requires l_min_xp2_from_corr_wx and
l_enable_relaxed_clipping to always have opposite values.

* Finally fixing the bug where Cx_fnc_Richardson needs to be interpolated
to thermodynamic levels in order to be used as C11_Skw_fnc.

* I fixed an issue with the generalized grid when the expldiff of rtm
and thlm is enabled.

* The variable gr now needs to be passed into subroutine pvertinterp
(which was formerly found in interpolation.F90) in order to generalize
the grid. This created a circular dependency, for grid_class references
interpolation, and now interpolation needed to reference grid_class
in order to use type grid. This road block prevented the model from
compiling. I moved subroutine pvertinterp to advance_clubb_core in
order to solve the problem.

* Moving the flag required editing the delimiters.

* I fixed a bug in the generalized grid test code that was resulting
in pdf_implicit_coefs_terms scalar variables not being read in
correctly for the flipped (descending) grid.

* Improved some error handling in clubb_driver.F90

* Fixed an issue where ascending and descending grids were producing
results that were not bit-for-bit to each other where centered
discretization was used. The issue occurred because 3 or more terms
were being added together in opposite orders between ascending and
descending grids. This fix ensures terms are added in the same order.

* Commiting changes to keep calculation order the same for additions
involving at least 3 terms from different vertical levels between
ascending and descending grids.`

* I removed bugs that were causing failures of the bit-for-bit
matching test (at -O0 optimization) between ascending and descending
grids. This group of fixes related to the code that calls pdf_closure
twice and calls the trapezoidal rule code.

* I have fixed the ascending vs. descending grid error for the situation
where l_partial_upwind_wp3 is enabled.

* I am removing the flag setting of l_mono_flux_lim_thlm to .false.
in flag group 15 of the ascending vs. descending grid tests.

Problem: Removing the constraints on thlm was causing one case (MC3E)
to blow up with a floating point exception in Morrison microphysics.
The issue was that a spike caused an extremely cold temperature to be
found. There is a line of code that takes the difference between
freezing/melting point temperature (273.15 K) and the temperature
at the grid level or sample point, multiplies it by constant, and then
takes EXP to that product. The large difference between temperature
and freezing/melting point, owing to the spike, caused a numerical
overflow to occur and the case to fail with a FPE.

Solution: There isn't any relevant code found in the monotonic flux
limiter that doesn't get tested if l_mono_flux_lim_thlm remains at
a setting of .true. The other parts of conditionals are covered
by setting l_mono_flux_lim_rtm to .false. The only parts of the
code unique to l_mono_flux_lim_thlm are the recording of stats
related directly to thlm. Thus, it makes sense to keep
l_mono_flux_lim_thlm set to .true. for the stability of the run
while turning off the other monotonic flux limiter flags.

* Updated the code to use break or return when clubb fatal error is
encountered, which is more consistent with the way CLUBB does business
now, then simply Fortran stop in place. This also allows the generalized
grid test to finally pass for all cases and all flag sets.
</comment><date>2025-03-22 23:39:40 -0500</date><id>685fa70650398309cae281d0306ed6437762caad</id><msg>Clubb test correct gg (#1237)</msg><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>interpolation.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>169</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/169/</url></nextBuild><previousBuild><number>167</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/167/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>167</buildNumber><marked><SHA1>6f0563a327d1cfefda2306f4c6d51ff65557810f</SHA1><branch><SHA1>6f0563a327d1cfefda2306f4c6d51ff65557810f</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>6f0563a327d1cfefda2306f4c6d51ff65557810f</SHA1><branch><SHA1>6f0563a327d1cfefda2306f4c6d51ff65557810f</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>6f0563a327d1cfefda2306f4c6d51ff65557810f</SHA1><branch><SHA1>6f0563a327d1cfefda2306f4c6d51ff65557810f</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#167</displayName><duration>2017446</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #167</fullDisplayName><id>167</id><keepLog>false</keepLog><number>167</number><queueId>7739</queueId><result>SUCCESS</result><timestamp>1741768028556</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/167/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>error_code.F90</affectedPath><commitId>8d394f926f93c152f873f1391656bbac6fea6481</commitId><timestamp>1741731122000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>The generalized grid test should not output a clubb fatal error when it
fails. Rather, they should output a unique error code specific to their
failure. Otherwise, failures due to numerical instability, etc., will
be confused as generalized grid failures in the Jenkins tests.
</comment><date>2025-03-11 17:12:02 -0500</date><id>8d394f926f93c152f873f1391656bbac6fea6481</id><msg>The generalized grid test should not output a clubb fatal error when it</msg><path><editType>edit</editType><file>error_code.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>168</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/168/</url></nextBuild><previousBuild><number>166</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/166/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>166</buildNumber><marked><SHA1>7bca04893f00be9db88d9833009e0e88bf1a1647</SHA1><branch><SHA1>7bca04893f00be9db88d9833009e0e88bf1a1647</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>7bca04893f00be9db88d9833009e0e88bf1a1647</SHA1><branch><SHA1>7bca04893f00be9db88d9833009e0e88bf1a1647</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>7bca04893f00be9db88d9833009e0e88bf1a1647</SHA1><branch><SHA1>7bca04893f00be9db88d9833009e0e88bf1a1647</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#166</displayName><duration>1946647</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #166</fullDisplayName><id>166</id><keepLog>false</keepLog><number>166</number><queueId>7658</queueId><result>SUCCESS</result><timestamp>1741426028501</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/166/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><commitId>d13c9049915a1e950527b987950e382dd9e47e7d</commitId><timestamp>1741367211000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Revert "I have no idea if it's appropriate to include gr in this statment,"

This reverts commit d2b125b12117d18474f2093b40e3e575a93422e7.
</comment><date>2025-03-07 11:06:51 -0600</date><id>d13c9049915a1e950527b987950e382dd9e47e7d</id><msg>Revert "I have no idea if it's appropriate to include gr in this statment,"</msg><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>c39543a1c216e789d89d540d4c30bd9898486e9e</commitId><timestamp>1741387523000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>I discovered that I inadvertently change an $acc statement that
is found in the monotonic flux limiter (why is it ALWAYS the
monotonic flux limiter?) back in be90159. In this commit, I am
setting the $acc statement back to what it is supposed to be.
</comment><date>2025-03-07 16:45:23 -0600</date><id>c39543a1c216e789d89d540d4c30bd9898486e9e</id><msg>I discovered that I inadvertently change an $acc statement that</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>167</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/167/</url></nextBuild><previousBuild><number>165</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/165/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>165</buildNumber><marked><SHA1>f29b8d8d274461772a37c52c9c1b2a642b2daf0d</SHA1><branch><SHA1>f29b8d8d274461772a37c52c9c1b2a642b2daf0d</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>f29b8d8d274461772a37c52c9c1b2a642b2daf0d</SHA1><branch><SHA1>f29b8d8d274461772a37c52c9c1b2a642b2daf0d</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>f29b8d8d274461772a37c52c9c1b2a642b2daf0d</SHA1><branch><SHA1>f29b8d8d274461772a37c52c9c1b2a642b2daf0d</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#165</displayName><duration>1723587</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #165</fullDisplayName><id>165</id><keepLog>false</keepLog><number>165</number><queueId>7564</queueId><result>SUCCESS</result><timestamp>1741253230058</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/165/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/subcol_SILHS.F90</affectedPath><commitId>4406cdbdbd463eb00481376774ca1d8e1f073eb4</commitId><timestamp>1741185589000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Fixed a compilation bug
</comment><date>2025-03-05 08:39:49 -0600</date><id>4406cdbdbd463eb00481376774ca1d8e1f073eb4</id><msg>Fixed a compilation bug</msg><path><editType>edit</editType><file>src/physics/cam/subcol_SILHS.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>stats_clubb_utilities.F90</affectedPath><commitId>997f0297808643a4ee76621e98fd3c7821948f41</commitId><timestamp>1741203326000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Eliminate GOTO statement in stats_clubb_utilities (#1233)

* Eliminate jump in stats_clubb_utilities
CLUBB ticket #975

Hard removed end parameter from read call
GOTO marker `100` removed since `end` parameter is gone and
added output of read error code to help debugging.

Before this change, if the read encountered an EOF error and the jump to marker 100 happened,
CLUBB would continue running (err_code=clubb_no_error) but no output files would be created.
After this change, err_code will be set to clubb_fatal_error and CLUBB prints an error message and returns.
</comment><date>2025-03-05 13:35:26 -0600</date><id>997f0297808643a4ee76621e98fd3c7821948f41</id><msg>Eliminate GOTO statement in stats_clubb_utilities (#1233)</msg><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><affectedPath>advance_windm_edsclrm_module.F90</affectedPath><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>c65a1eab66b642133992df67073c37f734f9276d</commitId><timestamp>1741219550000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Added some missing acc parallel statments around some the loops
I added to the code for the grid generalization test.
</comment><date>2025-03-05 18:05:50 -0600</date><id>c65a1eab66b642133992df67073c37f734f9276d</id><msg>Added some missing acc parallel statments around some the loops</msg><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>stats_clubb_utilities.F90</affectedPath><commitId>1f2eea8f772a494daf1517c840c036245ece8bfd</commitId><timestamp>1741219960000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Fixed a bug
</comment><date>2025-03-05 18:12:40 -0600</date><id>1f2eea8f772a494daf1517c840c036245ece8bfd</id><msg>Fixed a bug</msg><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><commitId>ba693e0d27c04cfbaf7755307a217f9ea44aa09e</commitId><timestamp>1741223016000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>I have no idea if it's appropriate to include gr in this statment,
but I'm just basically throwing dung at the wall at this point.
We'll see what sticks.
</comment><date>2025-03-05 19:03:36 -0600</date><id>ba693e0d27c04cfbaf7755307a217f9ea44aa09e</id><msg>I have no idea if it's appropriate to include gr in this statment,</msg><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>166</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/166/</url></nextBuild><previousBuild><number>164</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/164/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>164</buildNumber><marked><SHA1>4bb5edc64d1b8adfee7fd9cd778c3eb1d78181e5</SHA1><branch><SHA1>4bb5edc64d1b8adfee7fd9cd778c3eb1d78181e5</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>4bb5edc64d1b8adfee7fd9cd778c3eb1d78181e5</SHA1><branch><SHA1>4bb5edc64d1b8adfee7fd9cd778c3eb1d78181e5</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>4bb5edc64d1b8adfee7fd9cd778c3eb1d78181e5</SHA1><branch><SHA1>4bb5edc64d1b8adfee7fd9cd778c3eb1d78181e5</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#164</displayName><duration>1711404</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #164</fullDisplayName><id>164</id><keepLog>false</keepLog><number>164</number><queueId>7480</queueId><result>SUCCESS</result><timestamp>1741166829641</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/164/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>grid_class.F90</affectedPath><commitId>d080994ebfce2a1aae5509e6a1727a5fe4ef876b</commitId><timestamp>1741120069000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>I changed the variable type within grid function flip from dp to
core_rknd. I then needed to make some changes to BUGSrad driver
to compensate. The "dp" issue was discovered when WRF-CLUBB
wouldn't compile because of it (discrepancy between dp and core_rknd
in WRF-CLUBB that caused compilation errors for calls to flip
from advance_xm_wpxp, etc.)
</comment><date>2025-03-04 14:27:49 -0600</date><id>d080994ebfce2a1aae5509e6a1727a5fe4ef876b</id><msg>I changed the variable type within grid function flip from dp to</msg><path><editType>edit</editType><file>grid_class.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_clubb_core_module.F90</affectedPath><commitId>781a8ecf164f73570d972e8e49d46399b4eee022</commitId><timestamp>1741135026000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Fixed a compiling issue with CAM-CLUBB.
</comment><date>2025-03-04 18:37:06 -0600</date><id>781a8ecf164f73570d972e8e49d46399b4eee022</id><msg>Fixed a compiling issue with CAM-CLUBB.</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>saturation.F90</affectedPath><commitId>b7d415425bda941b81468bee63c68dcc9541a005</commitId><timestamp>1741139829000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Hopefully this helps the cpu vs. gpu tests.
</comment><date>2025-03-04 19:57:09 -0600</date><id>b7d415425bda941b81468bee63c68dcc9541a005</id><msg>Hopefully this helps the cpu vs. gpu tests.</msg><path><editType>edit</editType><file>saturation.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>165</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/165/</url></nextBuild><previousBuild><number>163</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/163/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>163</buildNumber><marked><SHA1>17ee8497050dc3f2a9d872853a0d8c13454e7af8</SHA1><branch><SHA1>17ee8497050dc3f2a9d872853a0d8c13454e7af8</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>17ee8497050dc3f2a9d872853a0d8c13454e7af8</SHA1><branch><SHA1>17ee8497050dc3f2a9d872853a0d8c13454e7af8</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>17ee8497050dc3f2a9d872853a0d8c13454e7af8</SHA1><branch><SHA1>17ee8497050dc3f2a9d872853a0d8c13454e7af8</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#163</displayName><duration>1384775</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #163</fullDisplayName><id>163</id><keepLog>false</keepLog><number>163</number><queueId>7404</queueId><result>SUCCESS</result><timestamp>1741080430573</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/163/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><affectedPath>src/physics/cam/subcol_SILHS.F90</affectedPath><commitId>17ee8497050dc3f2a9d872853a0d8c13454e7af8</commitId><timestamp>1741021378000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Updating subroutine calls for recent changes made to CLUBB.
</comment><date>2025-03-03 11:02:58 -0600</date><id>17ee8497050dc3f2a9d872853a0d8c13454e7af8</id><msg>Updating subroutine calls for recent changes made to CLUBB.</msg><path><editType>edit</editType><file>src/physics/cam/subcol_SILHS.F90</file></path><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>164</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/164/</url></nextBuild><previousBuild><number>162</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/162/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>162</buildNumber><marked><SHA1>dd174450eacbaa971ce9e1405296ea7f60a671a1</SHA1><branch><SHA1>dd174450eacbaa971ce9e1405296ea7f60a671a1</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>dd174450eacbaa971ce9e1405296ea7f60a671a1</SHA1><branch><SHA1>dd174450eacbaa971ce9e1405296ea7f60a671a1</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>dd174450eacbaa971ce9e1405296ea7f60a671a1</SHA1><branch><SHA1>dd174450eacbaa971ce9e1405296ea7f60a671a1</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#162</displayName><duration>1491870</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #162</fullDisplayName><id>162</id><keepLog>false</keepLog><number>162</number><queueId>7321</queueId><result>SUCCESS</result><timestamp>1740907627854</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/162/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>diffusion.F90</affectedPath><affectedPath>model_flags.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>clip_explicit.F90</affectedPath><affectedPath>advance_xm_wpxp_module.F90</affectedPath><affectedPath>pos_definite_module.F90</affectedPath><affectedPath>grid_class.F90</affectedPath><affectedPath>sponge_layer_damping.F90</affectedPath><affectedPath>turbulent_adv_pdf.F90</affectedPath><affectedPath>advance_windm_edsclrm_module.F90</affectedPath><affectedPath>advance_helper_module.F90</affectedPath><affectedPath>mono_flux_limiter.F90</affectedPath><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>mixing_length.F90</affectedPath><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><affectedPath>saturation.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>mean_adv.F90</affectedPath><affectedPath>fill_holes.F90</affectedPath><affectedPath>pdf_closure_module.F90</affectedPath><affectedPath>grid_adaptation.F90</affectedPath><affectedPath>sfc_varnce_module.F90</affectedPath><commitId>c4ffc9479567a66c1a43824ed79cc82b6a5c64a4</commitId><timestamp>1740847122000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Generalized grid (#1230)

* Added the necessary grid variables to the grid type (they're hardwired
for an Ascending Grid for now).

I also made the necessary changes, using those new variables, to
advance_wp2_wp3_module.F90.

* Added code to generalize advance_xm_wpxp_module.F90.

* Updated some of the boundary conditions for generalization in
grid_class.F90.

* Developing a unit test for CLUBB's grid functions.

* Adding the ability to toggle on or off the reverse direction grid test.

* Updating for development of a unit test comparing the ascending
and descending grids.

* I updated the generalized grid unit test to complete testing on all
the variables within the grid derived type for both the ascending
and descending grid directions.

* I updated the code to work symmetrically for an ascending and
descending grid for the zm2zt and zt2zm functions.

This commit, as well as the previous commit, is BIT_CHANGING.

* Updated to improve notes and comments in grid_class.F90 and to
enhance the reverse grid unit tests.

* Got rid of the compiler warnings in the new reverse direction
grid unit test.

* Updating the reverse grid unit tests so some random perturbations
are added to the grid heights when they are declared either on
the thermodynamic grid or on the momentum grid.

* Made some changes where the fstdout stream is exclusively used
and added some print statements.

* Mean advection has been modified for generalized directional gridding
and a test of the calls to mean advection has been added to the
reverse direction unit test.

* Updating diffusion so results are bit-for-bit identical between using
an ascending grid and using a descending grid at -O0 optimization.

This now works for both standard diffusion and also diffusion with the
l_upwind_Kh_dp_term flag turned on.

* I forgot to add the zm diffusion test, but the results are the same --
all pass!

* I have completed the unit tests for the PDF turbulent advection
subroutines and modified the appropriate sections of code so
that ascending and descending grids produce a bit-for-bit match
wiht -O0 optimization.

* Updated code for producing a bit-for-bit match (on -O0 optimization)
when comparing ascending grid direction against descending grid
direction for advance_wp2_wp3.

* The check for the LHS of advance_xp2_xpyp now passes.

* The ascending vs. descending bit-for-bit test (wiht optimization
set to -O0) now passes for advance_xp2_xpyp.

* I have successfully generalized the grid for advance_windm_edscrlm.
Ascending and descending runs now produce bit-for-bit results to
each other under -O0 optimization with the default flag
configuration.

* Fixing the ascending vs. descending grid test for advance_windm_edsclrm
for the case where l_imp_sfc_momentum_flux is set to false.

* Only perform check when l_predict_upwp_vpwp is turned off.

* This commit makes an ascending vs. descending test work for all
cases for advance_xm_wpxp when the mono flux limiter is turned off.

* The ascending vs. descending grid tests are finally working with
the monotonic flux limiter turned on (default settings).

* Removed some commented-out prints that I accidentally added during
the last commit.

* Updating positive_definite_module.F90 so that it works for
ascending vs. descending grids.

* The ascending vs. descending grid generalization test now works for
the Lscale_up portion of mixing length.

* The ascending vs. descending grid generalization now works successfully
for Lscale_down.

* Lscale is now generalized for ascending vs. descending gridding.

* Updated for generalizing sfc_varnce_module

* Updating advance_clubb_core_module for grid generalization.

* With this commit, the ascending vs. descending grid tests works
by calling advance_clubb_core twice from clubb_driver. They
produce bit-for-bit results on -O0 optimization for all intent(inout)
and intent(out) variables found in the call to advance_clubb_core.
This has only been tested for the default flag configuration.

* I am updating the ascending vs. descending grid test to check
both pdf_params and pdf_params_zm.

* I added pdf_implicit_coefs_terms and the sclr and edsclr family
of variables to the list of variables that are checked after coming
out of the calls to advance_clubb_core in the ascending vs. descending
bit-for-bit grid test.

* I added an improved display for the print messages for
the ascending vs. descending grid test.

* I moved the generalized grid test to its own file, which is called
from run_clubb.

* I removed much of the junk and clutter from the code. It had been
added over time for local tests of ascending vs. descending grid
types.

* Adding the l_generalized_grid_test flag to the code.

* I needed to alter the monotonic flux limiter that I just merged
in from the master branch so that the ascending vs. descending
grid generalization test works once again.

* Updated a piece of code in the solve routine for the monotonic
flux limiter for the grid generalization test.

* Clarified some comments

* I added a Jenkins file for the new clubb_generalized_vertical_grid_test,
which performs a run comparing ascending and descending grids with -O0
optimization and expects bit-for-bit results.

* The l_rev_direction_grid_test (part of the G unit tests) needs to be
compiled specially with -O0 optimization. Thus, I will set the flag
to run this test to .false. by default. A special Jenkins test will
be made to compile with the correct optimization and run only this
particular test.

* I updated the generalized vertical grid Jenkins test to turn off
sponge damping (thlm and rtm sponge damping) in the case files
for the CGILS S6, S11, and S12 cases.

* Caught a stats bug I had previously introduced for the um_ta and vm_ta
stats terms when l_predict_upwp_vpwp is turned off.
</comment><date>2025-03-01 10:38:42 -0600</date><id>c4ffc9479567a66c1a43824ed79cc82b6a5c64a4</id><msg>Generalized grid (#1230)</msg><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>model_flags.F90</file></path><path><editType>edit</editType><file>grid_class.F90</file></path><path><editType>edit</editType><file>fill_holes.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>advance_helper_module.F90</file></path><path><editType>edit</editType><file>clip_explicit.F90</file></path><path><editType>edit</editType><file>grid_adaptation.F90</file></path><path><editType>edit</editType><file>sfc_varnce_module.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>mean_adv.F90</file></path><path><editType>edit</editType><file>saturation.F90</file></path><path><editType>edit</editType><file>diffusion.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>edit</editType><file>turbulent_adv_pdf.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>pos_definite_module.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>sponge_layer_damping.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>163</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/163/</url></nextBuild><previousBuild><number>161</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/161/</url></previousBuild></build><build 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renaming operators `=&gt;` from clubb_api_module (#1232)

CLUBB ticket #1223

The original procedures were renamed to `&lt;name&gt;_api`.
Now, the `clubb_api_module` just has a regular `use` and `public` statement for them.
</comment><date>2025-02-26 18:11:11 -0600</date><id>2b0f47b5ac4af77b353fdeb400a762f30fba819f</id><msg>Removed renaming operators `=&gt;` from clubb_api_module (#1232)</msg><path><editType>edit</editType><file>grid_class.F90</file></path><path><editType>edit</editType><file>advance_windm_edsclrm_module.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path><path><editType>edit</editType><file>stats_sfc_module.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>stats_zm_module.F90</file></path><path><editType>edit</editType><file>advance_helper_module.F90</file></path><path><editType>edit</editType><file>mean_adv.F90</file></path><path><editType>edit</editType><file>calc_pressure.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>parameters_tunable.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path><path><editType>edit</editType><file>model_flags.F90</file></path><path><editType>edit</editType><file>T_in_K_module.F90</file></path><path><editType>edit</editType><file>mt95.F90</file></path><path><editType>edit</editType><file>advance_xp3_module.F90</file></path><path><editType>edit</editType><file>numerical_check.F90</file></path><path><editType>edit</editType><file>stats_zt_module.F90</file></path><path><editType>edit</editType><file>advance_xm_wpxp_module.F90</file></path><path><editType>edit</editType><file>mixing_length.F90</file></path><path><editType>edit</editType><file>parameters_model.F90</file></path><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>stats_rad_zm_module.F90</file></path><path><editType>edit</editType><file>corr_varnce_module.F90</file></path><path><editType>edit</editType><file>saturation.F90</file></path><path><editType>edit</editType><file>setup_clubb_pdf_params.F90</file></path><path><editType>edit</editType><file>diagnose_correlations_module.F90</file></path><path><editType>edit</editType><file>stats_rad_zt_module.F90</file></path><path><editType>edit</editType><file>fill_holes.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>245613178bae0ea5945d65285d21a467c6584d92</commitId><timestamp>1740615071000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Removed renaming operators `=&gt;` from clubb_api_module (#1232)

CLUBB ticket #1223

The original procedures were renamed to `&lt;name&gt;_api`.
Now, the `clubb_api_module` just has a regular `use` and `public` statement for them.
</comment><date>2025-02-26 18:11:11 -0600</date><id>245613178bae0ea5945d65285d21a467c6584d92</id><msg>Removed renaming operators `=&gt;` from clubb_api_module (#1232)</msg><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>162</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/162/</url></nextBuild><previousBuild><number>160</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/160/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>160</buildNumber><marked><SHA1>74b691e61cf8ca5594f2c03a39410b0e2f193e5e</SHA1><branch><SHA1>74b691e61cf8ca5594f2c03a39410b0e2f193e5e</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>74b691e61cf8ca5594f2c03a39410b0e2f193e5e</SHA1><branch><SHA1>74b691e61cf8ca5594f2c03a39410b0e2f193e5e</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>74b691e61cf8ca5594f2c03a39410b0e2f193e5e</SHA1><branch><SHA1>74b691e61cf8ca5594f2c03a39410b0e2f193e5e</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#160</displayName><duration>1364981</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #160</fullDisplayName><id>160</id><keepLog>false</keepLog><number>160</number><queueId>7077</queueId><result>SUCCESS</result><timestamp>1740475627874</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/160/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_scam_gfortran_debug_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/cam_global_ERP_Ln9_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/cam_gpu_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/cam_plot_scam_ifort/Jenkinsfile</affectedPath><commitId>74b691e61cf8ca5594f2c03a39410b0e2f193e5e</commitId><timestamp>1740433701000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Updates to jenkins scripts to better record output logs (#187)

</comment><date>2025-02-24 15:48:21 -0600</date><id>74b691e61cf8ca5594f2c03a39410b0e2f193e5e</id><msg>Updates to jenkins scripts to better record output logs (#187)</msg><path><editType>edit</editType><file>jenkins_tests/cam_global_ERP_Ln9_gfortran_test/Jenkinsfile</file></path><path><editType>edit</editType><file>jenkins_tests/cam_gpu_test/Jenkinsfile</file></path><path><editType>edit</editType><file>jenkins_tests/cam_plot_scam_ifort/Jenkinsfile</file></path><path><editType>edit</editType><file>jenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfile</file></path><path><editType>edit</editType><file>jenkins_tests/cam_scam_gfortran_debug_test/Jenkinsfile</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>161</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/161/</url></nextBuild><previousBuild><number>159</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/159/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>159</buildNumber><marked><SHA1>9da09d9a5168b14003c14bd7573cd11cb6d4b01c</SHA1><branch><SHA1>9da09d9a5168b14003c14bd7573cd11cb6d4b01c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>9da09d9a5168b14003c14bd7573cd11cb6d4b01c</SHA1><branch><SHA1>9da09d9a5168b14003c14bd7573cd11cb6d4b01c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>9da09d9a5168b14003c14bd7573cd11cb6d4b01c</SHA1><branch><SHA1>9da09d9a5168b14003c14bd7573cd11cb6d4b01c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#159</displayName><duration>2005752</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #159</fullDisplayName><id>159</id><keepLog>false</keepLog><number>159</number><queueId>7040</queueId><result>SUCCESS</result><timestamp>1740216426628</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/159/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>cdc77c1d92e7005f63ff0a70f2a37c9344f94e7e</commitId><timestamp>1740172850000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Getting rid of a couple of worthless lines of code. It's possible this
changes an output stat, making this commit BIT_CHANGING, but not
actually answer changing.
</comment><date>2025-02-21 15:20:50 -0600</date><id>cdc77c1d92e7005f63ff0a70f2a37c9344f94e7e</id><msg>Getting rid of a couple of worthless lines of code. It's possible this</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>fd213807e84e02d4777206d80a90009294782a78</commitId><timestamp>1740172965000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Should just delete instead of commenting out.
</comment><date>2025-02-21 15:22:45 -0600</date><id>fd213807e84e02d4777206d80a90009294782a78</id><msg>Should just delete instead of commenting out.</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>160</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/160/</url></nextBuild><previousBuild><number>158</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/158/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>158</buildNumber><marked><SHA1>8c4af18829b60c47d1e8454797e351b781f71bc1</SHA1><branch><SHA1>8c4af18829b60c47d1e8454797e351b781f71bc1</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>8c4af18829b60c47d1e8454797e351b781f71bc1</SHA1><branch><SHA1>8c4af18829b60c47d1e8454797e351b781f71bc1</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>8c4af18829b60c47d1e8454797e351b781f71bc1</SHA1><branch><SHA1>8c4af18829b60c47d1e8454797e351b781f71bc1</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#158</displayName><duration>1789444</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #158</fullDisplayName><id>158</id><keepLog>false</keepLog><number>158</number><queueId>6946</queueId><result>SUCCESS</result><timestamp>1740130027707</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/158/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>error_code.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><commitId>2913cd9a5b791c1e7248d2ad7dcfd89cfc9a2d0e</commitId><timestamp>1740075254000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Revert clubb api module changes (#1228)

* Revert intent changes to err_code_api in clubb_api_module to stay consistent with host models
CLUBB ticket #975

Reverted changes in advance_clubb_core_api and to corresponding call in run_clubb

Since the module variable is not used anywhere anymore, we can also remove it from the module
</comment><date>2025-02-20 12:14:14 -0600</date><id>2913cd9a5b791c1e7248d2ad7dcfd89cfc9a2d0e</id><msg>Revert clubb api module changes (#1228)</msg><path><editType>edit</editType><file>error_code.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>pdf_closure_module.F90</affectedPath><commitId>20aceeaecd53a592cea775ac5def92cea74294bd</commitId><timestamp>1740078773000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Fixed equality check in pdf_closure_module (#1229)

CLUBB ticket #975

WRF detected this error. Fixed it.
</comment><date>2025-02-20 13:12:53 -0600</date><id>20aceeaecd53a592cea775ac5def92cea74294bd</id><msg>Fixed equality check in pdf_closure_module (#1229)</msg><path><editType>edit</editType><file>pdf_closure_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>interpolation.F90</affectedPath><affectedPath>grid_adaptation.F90</affectedPath><affectedPath>model_flags.F90</affectedPath><commitId>bdaeacdc2600446ad65b582e5fdef98b97b6e8a8</commitId><timestamp>1740100234000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>add dycore grid with conservative remapping scheme

* add tunable parameter interp_from_dycore_grid_method

* add dycore interpolation to atex case with conservative remapping by ullrich

* remove new gpu commands

* add acc annotation for gpu

* remove acc annotation again

* add acc annotation for parallel loop

* add acc annotations for parallel loop execution

* change remapping subroutine to take number of levels and levels as input instead of whole grid object

* add more general functions to interpolate

* add and refactor functions for remapping values given on zm levels

* fix compiler errors and refactoring to stay under 100 chars per line

* remove TODOs and used new interpolating function in interpolate_forcings

* add functions for adaptive grid generation and grid density function normalization

* add conservative ullrich remapping to cases with forcing time dependent inputs

* add grid adaptation and flag

* clean up and add warning for case when remapping from dycore flag cannot be used

* some refactoring

* add logical flag for dycore and renamed flags for dycore and grid adaptation

* remove ifdefs

* refactoring

* add units

* changed Lscale to inverse

---------

Co-authored-by: Steffen Carstensen &lt;steffenc34@icloud.com&gt;
</comment><date>2025-02-20 19:10:34 -0600</date><id>bdaeacdc2600446ad65b582e5fdef98b97b6e8a8</id><msg>add dycore grid with conservative remapping scheme</msg><path><editType>edit</editType><file>interpolation.F90</file></path><path><editType>add</editType><file>grid_adaptation.F90</file></path><path><editType>edit</editType><file>model_flags.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>bld/namelist_files/namelist_definition.xml</affectedPath><affectedPath>bld/build-namelist</affectedPath><affectedPath>bld/namelist_files/namelist_defaults_cam.xml</affectedPath><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>2d33bdfc7819e515df367ea87c81d6d74ad1d632</commitId><timestamp>1740100281000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>add flags (#186)

* add two new flags

* add unset_i

* add new logical flag for dycore and renamed flags for dycore and grid adaptation

* small fix
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CLUBB ticket #975

Module variable `err_code` was removed and replaced by intent(inout) subroutine parameters.

Added messages to `error stop`s in `clubb_api_module`
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CLUBB ticket #975

Module variable `err_code` was removed and replaced by intent(inout) subroutine parameters.

Added messages to `error stop`s in `clubb_api_module`
</comment><date>2025-02-19 11:16:13 -0600</date><id>8c82ca7ba8400aa6b5558d4666074f67ea42a2c8</id><msg>Remove err code (#1218)</msg><path><editType>edit</editType><file>output_2D_samples_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>numerical_check.F90</affectedPath><commitId>a79e7440d2291b9258200180e211896002d72c84</commitId><timestamp>1739987333000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Renamed check_res to err_code in numerical_check.F90 for consistency (#1227)

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This code change is BIT_CHANGING for extreme cases (e.g. TWP_ICE, LBA, ARM_97).
Changed configurable_model_flags.in files and default value in model_flags.F90.

For CLUBB ticket #1165.
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* Making a fast version of the serial loop to check if we even need to perform the slow version at all.

* Updates

* Final touches to make new version logically the same.

* Improving comments and variables names
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Added l_wp2_fill_holes_tke to clubb_intr.F90
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Added new hole-filling method which takes TKE from up2 and vp2
CLUBB ticket #1165

BIT_CHANGING if flag `l_wp2_fill_holes_tke` is set to true
Introduced new flag `l_wp2_fill_holes_tke` to turn on new wp2 hole-filling subroutine
that takes TKE from up2 and vp2.
</comment><date>2025-01-16 16:06:31 -0600</date><id>0c7bd6c5950299772d6702dd2eacc6b4fbeb62d9</id><msg>Added new hole-filling method which takes TKE from up2 and vp2 (#1217)</msg><path><editType>edit</editType><file>clip_explicit.F90</file></path><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path><path><editType>edit</editType><file>stats_clubb_utilities.F90</file></path><path><editType>edit</editType><file>model_flags.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>fill_holes.F90</file></path><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>153</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/153/</url></nextBuild><previousBuild><number>151</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/151/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>151</buildNumber><marked><SHA1>b3c6f29d0d1a50b165ee1e44a515e6d23991285c</SHA1><branch><SHA1>b3c6f29d0d1a50b165ee1e44a515e6d23991285c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>b3c6f29d0d1a50b165ee1e44a515e6d23991285c</SHA1><branch><SHA1>b3c6f29d0d1a50b165ee1e44a515e6d23991285c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>b3c6f29d0d1a50b165ee1e44a515e6d23991285c</SHA1><branch><SHA1>b3c6f29d0d1a50b165ee1e44a515e6d23991285c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#151</displayName><duration>1961615</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #151</fullDisplayName><id>151</id><keepLog>false</keepLog><number>151</number><queueId>6047</queueId><result>SUCCESS</result><timestamp>1734686826011</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/151/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>pdf_utilities.F90</affectedPath><affectedPath>pdf_closure_module.F90</affectedPath><affectedPath>advance_helper_module.F90</affectedPath><commitId>1d49bab84b798a9220af6e984d9ecc6c884f9881</commitId><timestamp>1734646199000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Fix binormal correlation clipping (#1199)

Fixed clipping in binormal correlation calc
CLUBB ticket #1164

BIT_CHANGING

* Implemented new denominator with smooth_max clipping
* Created subroutine `smooth_corr_quotient` in pdf_utilities.F90, outsourcing smooth correlation division
* This subroutine is used `calc_comp_corrs_binormal` and `transform_pdf_chi_eta_component`
</comment><date>2024-12-19 16:09:59 -0600</date><id>1d49bab84b798a9220af6e984d9ecc6c884f9881</id><msg>Fix binormal correlation clipping (#1199)</msg><path><editType>edit</editType><file>advance_helper_module.F90</file></path><path><editType>edit</editType><file>pdf_closure_module.F90</file></path><path><editType>edit</editType><file>pdf_utilities.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>152</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/152/</url></nextBuild><previousBuild><number>150</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/150/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>150</buildNumber><marked><SHA1>5fd1defe00a484aba044b60c03807921b8e895f8</SHA1><branch><SHA1>5fd1defe00a484aba044b60c03807921b8e895f8</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>5fd1defe00a484aba044b60c03807921b8e895f8</SHA1><branch><SHA1>5fd1defe00a484aba044b60c03807921b8e895f8</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>5fd1defe00a484aba044b60c03807921b8e895f8</SHA1><branch><SHA1>5fd1defe00a484aba044b60c03807921b8e895f8</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#150</displayName><duration>1419274</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #150</fullDisplayName><id>150</id><keepLog>false</keepLog><number>150</number><queueId>5921</queueId><result>SUCCESS</result><timestamp>1734427628903</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/150/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>99f0cbcb7ebd50f94c8242b4d6b0141c0040070e</commitId><timestamp>1734371299000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Changing a couple loop limits in mono flux limiter.

Results do not change.
</comment><date>2024-12-16 11:48:19 -0600</date><id>99f0cbcb7ebd50f94c8242b4d6b0141c0040070e</id><msg>Changing a couple loop limits in mono flux limiter.</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>151</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/151/</url></nextBuild><previousBuild><number>149</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/149/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>149</buildNumber><marked><SHA1>091073d591d52a7f7a78d033e68e7059e62e68bb</SHA1><branch><SHA1>091073d591d52a7f7a78d033e68e7059e62e68bb</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>091073d591d52a7f7a78d033e68e7059e62e68bb</SHA1><branch><SHA1>091073d591d52a7f7a78d033e68e7059e62e68bb</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>091073d591d52a7f7a78d033e68e7059e62e68bb</SHA1><branch><SHA1>091073d591d52a7f7a78d033e68e7059e62e68bb</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#149</displayName><duration>2003935</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #149</fullDisplayName><id>149</id><keepLog>false</keepLog><number>149</number><queueId>5844</queueId><result>SUCCESS</result><timestamp>1734168426289</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/149/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>66962221d214a079b4b9826630a114f6dd141860</commitId><timestamp>1734129641000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Recoded a loop within the mono flux limiter so that it's written
in a more convenient manner to allow for easier coding for
generalized gridding.

Results are bit-for-bit.
</comment><date>2024-12-13 16:40:41 -0600</date><id>66962221d214a079b4b9826630a114f6dd141860</id><msg>Recoded a loop within the mono flux limiter so that it's written</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>c4c819565c782d449a59498d1ba632bb31787832</commitId><timestamp>1734130983000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Changed some variable names so that it is clear that, while they contain
the word wpxp_, they are actually thermodynamic-level variables.

Results are bit-for-bit.
</comment><date>2024-12-13 17:03:03 -0600</date><id>c4c819565c782d449a59498d1ba632bb31787832</id><msg>Changed some variable names so that it is clear that, while they contain</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>39ebca243bd00296e6e7ec261e84586ea0803609</commitId><timestamp>1734132394000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Within the mono flux limiter, a thermodynamic-level variable needed to
be interpolated to momentum levels so it could be directly compared
to wpxp.

The results of this change are BIT_CHANGING for the ARM 97, MC3E,
and TWP-ICE cases.
</comment><date>2024-12-13 17:26:34 -0600</date><id>39ebca243bd00296e6e7ec261e84586ea0803609</id><msg>Within the mono flux limiter, a thermodynamic-level variable needed to</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>016a671fc4b15c32a7169398a2dfd7952ffc5a5f</commitId><timestamp>1734133196000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>I forgot to add the new variable to the Atlantic Coast Conference
statements in the previous commit.
</comment><date>2024-12-13 17:39:56 -0600</date><id>016a671fc4b15c32a7169398a2dfd7952ffc5a5f</id><msg>I forgot to add the new variable to the Atlantic Coast Conference</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>150</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/150/</url></nextBuild><previousBuild><number>148</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/148/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>148</buildNumber><marked><SHA1>9c53ae3ba216bd73e36c91494fbe7372c018ab1c</SHA1><branch><SHA1>9c53ae3ba216bd73e36c91494fbe7372c018ab1c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>9c53ae3ba216bd73e36c91494fbe7372c018ab1c</SHA1><branch><SHA1>9c53ae3ba216bd73e36c91494fbe7372c018ab1c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>9c53ae3ba216bd73e36c91494fbe7372c018ab1c</SHA1><branch><SHA1>9c53ae3ba216bd73e36c91494fbe7372c018ab1c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#148</displayName><duration>1841174</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #148</fullDisplayName><id>148</id><keepLog>false</keepLog><number>148</number><queueId>5672</queueId><result>SUCCESS</result><timestamp>1733563627665</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/148/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>model_flags.F90</affectedPath><commitId>52e5a511669d909c3510660bdf8c7dbcc6074660</commitId><timestamp>1733514208000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Changed default setting of flag l_min_wp2_from_corr_wx to false (#1216)

CLUBB ticket #1165

BIT_CHANGING
Changed default setting in configurable_model_flags.in and model_flags.F90
to decrease clipping contribution to `wp2` and increase clipping to `rtp2` and `thl2`.
</comment><date>2024-12-06 13:43:28 -0600</date><id>52e5a511669d909c3510660bdf8c7dbcc6074660</id><msg>Changed default setting of flag l_min_wp2_from_corr_wx to false (#1216)</msg><path><editType>edit</editType><file>model_flags.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>149</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/149/</url></nextBuild><previousBuild><number>147</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/147/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>147</buildNumber><marked><SHA1>92c98c95b70877aecebcae635ab76ebaf419d311</SHA1><branch><SHA1>92c98c95b70877aecebcae635ab76ebaf419d311</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>92c98c95b70877aecebcae635ab76ebaf419d311</SHA1><branch><SHA1>92c98c95b70877aecebcae635ab76ebaf419d311</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>92c98c95b70877aecebcae635ab76ebaf419d311</SHA1><branch><SHA1>92c98c95b70877aecebcae635ab76ebaf419d311</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#147</displayName><duration>1424230</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #147</fullDisplayName><id>147</id><keepLog>false</keepLog><number>147</number><queueId>5599</queueId><result>SUCCESS</result><timestamp>1733477228755</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/147/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>advance_wp2_wp3_module.F90</affectedPath><commitId>4e0d13d0080c598b5b08359a892c9fa1452650ac</commitId><timestamp>1733422068000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Added up2 and vp2 to calculation of wp2_min_array (#1215)

CLUBB ticket #1165

This is BIT_CHANGING for the cases ARM_97, ATEX, CGILS_S6, GABLS3_NIGHT, LBA, MPACE_B, and TWP_ICE out of the priority cases.
These lines of code were added since the fields `u`, `v`, `rt`, and `thl`, and their correlations with `w` should be treated equally.
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CLUBB ticket #1165

This is BIT_CHANGING for at least the cases ARM_97 and TWP_ICE,
and likely any other more non-standard cases.
This change will prevent the minimum clipping value for wp2 from exploding when l_min_wp2_from_corr_wx=.true.
</comment><date>2024-12-04 09:59:01 -0600</date><id>23cb94c98b8d838afbe647e3dfedac0e5dfd4a92</id><msg>Reduced the upper bound for wp2_min_array to 1.0 (#1214)</msg><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>147</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/147/</url></nextBuild><previousBuild><number>145</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/145/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>145</buildNumber><marked><SHA1>ab7c6f2d2591fed86c6eb2b4efc80e73af2be84b</SHA1><branch><SHA1>ab7c6f2d2591fed86c6eb2b4efc80e73af2be84b</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>ab7c6f2d2591fed86c6eb2b4efc80e73af2be84b</SHA1><branch><SHA1>ab7c6f2d2591fed86c6eb2b4efc80e73af2be84b</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>ab7c6f2d2591fed86c6eb2b4efc80e73af2be84b</SHA1><branch><SHA1>ab7c6f2d2591fed86c6eb2b4efc80e73af2be84b</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#145</displayName><duration>847441</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #145</fullDisplayName><id>145</id><keepLog>false</keepLog><number>145</number><queueId>5452</queueId><result>SUCCESS</result><timestamp>1733304430559</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/145/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><affectedPath>error_code.F90</affectedPath><affectedPath>clip_explicit.F90</affectedPath><commitId>c5312bc035e586768d959bcaf31d092f5bd3cd40</commitId><timestamp>1733239180000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Likely non-bit-changing housekeeping (#1213)

Non-bit-changing housekeeping regarding wp2 clipping
CLUBB ticket #1165

Renamed threshold_array -&gt; wp2_min_array
Moved upper clipping of wp2 into clip_variance
Added warning outputs where wp2 is hard-clipped
Added debugging checks to hole-filling and wp2_min_array clipping
Some necessary OpenACC-modifications
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* Multi_col output update to enable averaging over timesteps and outputting with single precision. This replaces the timestep batched output method used before, which was only noticably faster at low column numbers. This is technically BC (edited during merge, PR no longer BC), because the single precision output will be interpretted as different from the current double precision output.

* Small cleanup

* Script updates

* Script update

* Script update

* Adding capability to output multi_col as double or single precision using new flag l_output_double_prec.

* Removing accidentally added file.

* Making new jenkins script run single and double precision tests.

* Update to jenkins test
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</comment><date>2024-11-19 12:19:19 -0600</date><id>786953e03d2840b3c737e701024aae136eef8942</id><msg>Making compatible with latest clubb changes</msg><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></culprit><inProgress>false</inProgress><nextBuild><number>144</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/144/</url></nextBuild><previousBuild><number>142</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/142/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>142</buildNumber><marked><SHA1>7a187761ac14a1987d6855c084c7987d2bc23a16</SHA1><branch><SHA1>7a187761ac14a1987d6855c084c7987d2bc23a16</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>7a187761ac14a1987d6855c084c7987d2bc23a16</SHA1><branch><SHA1>7a187761ac14a1987d6855c084c7987d2bc23a16</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>7a187761ac14a1987d6855c084c7987d2bc23a16</SHA1><branch><SHA1>7a187761ac14a1987d6855c084c7987d2bc23a16</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#142</displayName><duration>1446777</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #142</fullDisplayName><id>142</id><keepLog>false</keepLog><number>142</number><queueId>5078</queueId><result>SUCCESS</result><timestamp>1732008425736</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/142/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>pdf_utilities.F90</affectedPath><affectedPath>output_netcdf.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>mono_flux_limiter.F90</affectedPath><commitId>855c5676670316769f00d7ccfe64a69a6b16d57a</commitId><timestamp>1731982903000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb Driver Semi GPUization Part4 (#1209)

* Initial GPUization, and testing multi_col output method as single precision.

* advance_clubb_core tweaks

* Adding radht acc update

* Updates

* Adding new flags to the mono_flux test to prevent CPU and GPU divergence which breaks it.

* Small changes and improvements.

* Making new monoflux test lines

* Reworking some SILHS GPUization to make it more similar to the GPU code in the rest of clubb. This adds some extra parts that run on GPUs, so it is BIT_CHANGING

* Cleanup and comment update

* Cleanup

* Removing DCUDA flag from compile config scripts to help GPU and CPU results match for silhs cases

* Removing accidentally added file.

* Updating script

* Updating script

* Updating script

* Updating tolerance in script to handle rico_silhs differences, and hopefully final GPU updates

* Small cleanup

* Adding option to multi_col diff check script to scale the differences by the field avg. This is only needed (so far) for thlm differences that are slightly too large

* Testing gpu lock method

* Adding GPU locking to rest of GPU tests.

* Small fixes
</comment><date>2024-11-18 20:21:43 -0600</date><id>855c5676670316769f00d7ccfe64a69a6b16d57a</id><msg>Clubb Driver Semi GPUization Part4 (#1209)</msg><path><editType>edit</editType><file>mono_flux_limiter.F90</file></path><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>pdf_utilities.F90</file></path><path><editType>edit</editType><file>output_netcdf.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>silhs_api_module.F90</affectedPath><affectedPath>transform_to_pdf_module.F90</affectedPath><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>474436dd4a94e1167c527cbf7cd07d0189b1a0b4</commitId><timestamp>1731982903000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Clubb Driver Semi GPUization Part4 (#1209)

* Initial GPUization, and testing multi_col output method as single precision.

* advance_clubb_core tweaks

* Adding radht acc update

* Updates

* Adding new flags to the mono_flux test to prevent CPU and GPU divergence which breaks it.

* Small changes and improvements.

* Making new monoflux test lines

* Reworking some SILHS GPUization to make it more similar to the GPU code in the rest of clubb. This adds some extra parts that run on GPUs, so it is BIT_CHANGING

* Cleanup and comment update

* Cleanup

* Removing DCUDA flag from compile config scripts to help GPU and CPU results match for silhs cases

* Removing accidentally added file.

* Updating script

* Updating script

* Updating script

* Updating tolerance in script to handle rico_silhs differences, and hopefully final GPU updates

* Small cleanup

* Adding option to multi_col diff check script to scale the differences by the field avg. This is only needed (so far) for thlm differences that are slightly too large

* Testing gpu lock method

* Adding GPU locking to rest of GPU tests.

* Small fixes
</comment><date>2024-11-18 20:21:43 -0600</date><id>474436dd4a94e1167c527cbf7cd07d0189b1a0b4</id><msg>Clubb Driver Semi GPUization Part4 (#1209)</msg><path><editType>edit</editType><file>transform_to_pdf_module.F90</file></path><path><editType>edit</editType><file>silhs_api_module.F90</file></path><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>143</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/143/</url></nextBuild><previousBuild><number>141</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/141/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>141</buildNumber><marked><SHA1>86df31ff4b0640c119437d4690e9556fa4ff36e5</SHA1><branch><SHA1>86df31ff4b0640c119437d4690e9556fa4ff36e5</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>86df31ff4b0640c119437d4690e9556fa4ff36e5</SHA1><branch><SHA1>86df31ff4b0640c119437d4690e9556fa4ff36e5</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>86df31ff4b0640c119437d4690e9556fa4ff36e5</SHA1><branch><SHA1>86df31ff4b0640c119437d4690e9556fa4ff36e5</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#141</displayName><duration>1550382</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #141</fullDisplayName><id>141</id><keepLog>false</keepLog><number>141</number><queueId>4958</queueId><result>SUCCESS</result><timestamp>1731490027323</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/141/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>transform_to_pdf_module.F90</affectedPath><affectedPath>latin_hypercube_driver_module.F90</affectedPath><commitId>8c6a252b73c14a75407b86668c4fb8da3d5f0cf8</commitId><timestamp>1731438290000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Multi Column Mirror Test (#1206)

* Making fcor_nl to set multi_col version of fcor. This is a BIT_CHANGING bug fix that only affects the extra columns.

* Removing async clauses in silhs.

* Adding option to silhs to copy the random number pool from the first column to all the others.

* Fixing fcor name in arm_97_model.in

* Fixing small bug in cases that run non-silhs radiation.

* Fixing missing acc statement in atex code

* Adding scripts for new test

* Script update

* Script update

* Script update

* Script update

* Script update

* Script update

* Test error

* Test error

* Test error

* Script update

* Script update

* Script update

* Script update

* Script update

* Script updates

* Script updates

* Final update to script
</comment><date>2024-11-12 13:04:50 -0600</date><id>8c6a252b73c14a75407b86668c4fb8da3d5f0cf8</id><msg>Multi Column Mirror Test (#1206)</msg><path><editType>edit</editType><file>transform_to_pdf_module.F90</file></path><path><editType>edit</editType><file>latin_hypercube_driver_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>142</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/142/</url></nextBuild><previousBuild><number>140</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/140/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>140</buildNumber><marked><SHA1>347646e13207db4729db167a1a55fcba7f49f8d2</SHA1><branch><SHA1>347646e13207db4729db167a1a55fcba7f49f8d2</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>347646e13207db4729db167a1a55fcba7f49f8d2</SHA1><branch><SHA1>347646e13207db4729db167a1a55fcba7f49f8d2</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>347646e13207db4729db167a1a55fcba7f49f8d2</SHA1><branch><SHA1>347646e13207db4729db167a1a55fcba7f49f8d2</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#140</displayName><duration>1532799</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #140</fullDisplayName><id>140</id><keepLog>false</keepLog><number>140</number><queueId>4849</queueId><result>SUCCESS</result><timestamp>1731403628177</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/140/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_xp2_xpyp_module.F90</affectedPath><commitId>0c81e032e7c8627c963780496471ffda1f533007</commitId><timestamp>1731347440000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>As part of generalizing the code to work with both an ascending and
descending grid, I discovered an issue.  The issue occurs in the
xp2/xpyp "upwind" turbulent advection code and involves the "sgn_"
variables. Ultimately, for other PDFs, I was setting this variable
using equations of the form

sign( one, variable)

which set the value to either 1 or -1 no matter the value of variable.

However, for the ADG1 PDF, I was lazy and simply just set the value
of sgn_ to be equal to wp3_on_wp2.

The issue arose when wp3_on_wp2 had a value of 0, and therefore is
neither negative or positive.

To rectifiy the issue, all settings of "sgn_" variables now use
equations of the form sign( one, variable ).

For a vast majority of cases, this change had absolutely
no effect on the results and everything stayed bit-for-bit.

However, BIT_CHANGING results were detected for CGILS S6,
MC3E, and TWP-ICE.
</comment><date>2024-11-11 11:50:40 -0600</date><id>0c81e032e7c8627c963780496471ffda1f533007</id><msg>As part of generalizing the code to work with both an ascending and</msg><path><editType>edit</editType><file>advance_xp2_xpyp_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>141</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/141/</url></nextBuild><previousBuild><number>139</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/139/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>139</buildNumber><marked><SHA1>0f55f58727106c64e4a8067c5af21d1fe476b578</SHA1><branch><SHA1>0f55f58727106c64e4a8067c5af21d1fe476b578</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>0f55f58727106c64e4a8067c5af21d1fe476b578</SHA1><branch><SHA1>0f55f58727106c64e4a8067c5af21d1fe476b578</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>0f55f58727106c64e4a8067c5af21d1fe476b578</SHA1><branch><SHA1>0f55f58727106c64e4a8067c5af21d1fe476b578</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#139</displayName><duration>1535423</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #139</fullDisplayName><id>139</id><keepLog>false</keepLog><number>139</number><queueId>4737</queueId><result>SUCCESS</result><timestamp>1731144426386</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/139/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_clubb_core_module.F90</affectedPath><commitId>3da14a5f677fd439f17935cbb17edcf5d0c408c5</commitId><timestamp>1731108979000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>Making a correction to the doubled plus sign from commit a1fcfe8.
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</comment><date>2024-11-07 13:59:12 -0600</date><id>3e8029ad73ea28d9d444982e17e0f996e7a93cf2</id><msg>Moving Lscale from an acc create statement inside clubb to the acc output statement in clubb_api. This is bug fix that is BIT_CHANGING, but only for silhs cases running on the GPU. Also using this to add BIT_CHANGING:aff1bb12551c5b3a8ab1c4d773ef5c17fb96c53b, as that commit was BC but just missing the message.</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>output_netcdf.F90</affectedPath><affectedPath>advance_clubb_core_module.F90</affectedPath><affectedPath>clubb_api_module.F90</affectedPath><affectedPath>calc_pressure.F90</affectedPath><commitId>c30ea55fd03ba8807e91c53d43e6d9467ce88d36</commitId><timestamp>1731015610000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Various Small Tweaks (#1205)

* Batching multicol output. Unfinished, need to make calls_p_out a namelist input and handle the case that it doesn't evenly divide the total number of timesteps.

* Pushin column loop into initialize_clubb_variables

* Adding explicit loops in main timestepping loop and pushing columns loop into l_calc_thlp2_rad

* Various small loop pushes and improvements.

* Adding argument to create_multi_col_params.py to add calls_p_out to namelist.

* Final little tweaks

* Tiny fixes

* Changing var name calls_p_out to calls_per_out
</comment><date>2024-11-07 15:40:10 -0600</date><id>c30ea55fd03ba8807e91c53d43e6d9467ce88d36</id><msg>Various Small Tweaks (#1205)</msg><path><editType>edit</editType><file>advance_clubb_core_module.F90</file></path><path><editType>edit</editType><file>clubb_api_module.F90</file></path><path><editType>edit</editType><file>calc_pressure.F90</file></path><path><editType>edit</editType><file>output_netcdf.F90</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>src/physics/cam/clubb_intr.F90</affectedPath><commitId>11b0384e1af546126ad7f9fd616498a9d449ff13</commitId><timestamp>1731015619000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Making compatible with latest clubb changes
</comment><date>2024-11-07 15:40:19 -0600</date><id>11b0384e1af546126ad7f9fd616498a9d449ff13</id><msg>Making compatible with latest clubb changes</msg><path><editType>edit</editType><file>src/physics/cam/clubb_intr.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></culprit><inProgress>false</inProgress><nextBuild><number>139</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/139/</url></nextBuild><previousBuild><number>137</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/137/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>137</buildNumber><marked><SHA1>37cd6eb045fc3dc85f0278d1850df125b7da2b7c</SHA1><branch><SHA1>37cd6eb045fc3dc85f0278d1850df125b7da2b7c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>37cd6eb045fc3dc85f0278d1850df125b7da2b7c</SHA1><branch><SHA1>37cd6eb045fc3dc85f0278d1850df125b7da2b7c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>37cd6eb045fc3dc85f0278d1850df125b7da2b7c</SHA1><branch><SHA1>37cd6eb045fc3dc85f0278d1850df125b7da2b7c</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#137</displayName><duration>2057580</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #137</fullDisplayName><id>137</id><keepLog>false</keepLog><number>137</number><queueId>4593</queueId><result>SUCCESS</result><timestamp>1730798829967</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/137/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>interpolation.F90</affectedPath><commitId>2bcbfda78b61e1291c1635fa58c7a9a094ca627d</commitId><timestamp>1730750376000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></author><authorEmail>noreply@github.com</authorEmail><comment>Prescribe Forcings GPUization (#1204)

* First bit of prescribe forcings GPUization. Only tested with arm so far.

* Cherry-pick merge

* Missed file

* GPUizing more cases

* Rest of cases GPUized

* Little more GPUization and fixes.

* Bug fix to minloc calculation affecting cases with l_modify_bc_for_cnvg_test=.true., unclear why this is a bug. Also adding ifdef around print in GPU code

* Adding Benchmark_cases to OMP conversion list
</comment><date>2024-11-04 13:59:36 -0600</date><id>2bcbfda78b61e1291c1635fa58c7a9a094ca627d</id><msg>Prescribe Forcings GPUization (#1204)</msg><path><editType>edit</editType><file>interpolation.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/noreply</absoluteUrl><fullName>noreply</fullName></culprit><inProgress>false</inProgress><nextBuild><number>138</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/138/</url></nextBuild><previousBuild><number>136</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/136/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>136</buildNumber><marked><SHA1>fd8e6875fb2af8688784b390081a8e77f4429162</SHA1><branch><SHA1>fd8e6875fb2af8688784b390081a8e77f4429162</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>fd8e6875fb2af8688784b390081a8e77f4429162</SHA1><branch><SHA1>fd8e6875fb2af8688784b390081a8e77f4429162</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>fd8e6875fb2af8688784b390081a8e77f4429162</SHA1><branch><SHA1>fd8e6875fb2af8688784b390081a8e77f4429162</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#136</displayName><duration>1380963</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #136</fullDisplayName><id>136</id><keepLog>false</keepLog><number>136</number><queueId>4250</queueId><result>SUCCESS</result><timestamp>1729844827550</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/136/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>advance_wp2_wp3_module.F90</affectedPath><commitId>9072b68949f158fab2142de3e9f3159d61bb584e</commitId><timestamp>1729779844000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></author><authorEmail>bmg2@uwm.edu</authorEmail><comment>I am making the loops for the wp3 ta term (using ADG1 PDF) symmetric.
Prior to this, they ran from thermo levels 2 to nzt-2. This change
makes them symmetric by running them from 2 to nzt-1. There are
no degradations to the results as a result of this change. This
change makes it easier to generalize CLUBB's grid for both
ascending and descending grid directions. The results of this change
are BIT_CHANGING.
</comment><date>2024-10-24 09:24:04 -0500</date><id>9072b68949f158fab2142de3e9f3159d61bb584e</id><msg>I am making the loops for the wp3 ta term (using ADG1 PDF) symmetric.</msg><path><editType>edit</editType><file>advance_wp2_wp3_module.F90</file></path></item><kind>git</kind></changeSet><culprit><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/bmg2</absoluteUrl><fullName>bmg2</fullName></culprit><inProgress>false</inProgress><nextBuild><number>137</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/137/</url></nextBuild><previousBuild><number>135</number><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/135/</url></previousBuild></build><build _class='org.jenkinsci.plugins.workflow.job.WorkflowRun'><action _class='hudson.model.CauseAction'><cause _class='hudson.triggers.SCMTrigger$SCMTriggerCause'><shortDescription>Started by an SCM change</shortDescription></cause></action><action></action><action _class='org.jenkinsci.plugins.workflow.libs.LibrariesAction'></action><action></action><action></action><action _class='hudson.plugins.git.util.BuildData'><buildsByBranchName><refsremotesoriginclubb_silhs_devel _class='hudson.plugins.git.util.Build'><buildNumber>135</buildNumber><marked><SHA1>f6318d0b524cf667ef008f22ef15c3f4e2e10c34</SHA1><branch><SHA1>f6318d0b524cf667ef008f22ef15c3f4e2e10c34</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></marked><revision><SHA1>f6318d0b524cf667ef008f22ef15c3f4e2e10c34</SHA1><branch><SHA1>f6318d0b524cf667ef008f22ef15c3f4e2e10c34</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></revision></refsremotesoriginclubb_silhs_devel></buildsByBranchName><lastBuiltRevision><SHA1>f6318d0b524cf667ef008f22ef15c3f4e2e10c34</SHA1><branch><SHA1>f6318d0b524cf667ef008f22ef15c3f4e2e10c34</SHA1><name>refs/remotes/origin/clubb_silhs_devel</name></branch></lastBuiltRevision><remoteUrl>https://github.com/larson-group/cam.git</remoteUrl><scmName></scmName></action><action></action><action></action><action></action><action></action><action _class='org.jenkinsci.plugins.displayurlapi.actions.RunDisplayAction'></action><action _class='org.jenkinsci.plugins.pipeline.modeldefinition.actions.RestartDeclarativePipelineAction'></action><action></action><action _class='org.jenkinsci.plugins.workflow.job.views.FlowGraphAction'></action><action></action><action></action><action></action><building>false</building><displayName>#135</displayName><duration>1064541</duration><estimatedDuration>2373579</estimatedDuration><fullDisplayName>cam_BFB_coarse_res_gfortran_test #135</fullDisplayName><id>135</id><keepLog>false</keepLog><number>135</number><queueId>4184</queueId><result>SUCCESS</result><timestamp>1729758428580</timestamp><url>http://carson.math.uwm.edu/jenkins/job/cam_BFB_coarse_res_gfortran_test/135/</url><changeSet _class='hudson.plugins.git.GitChangeSetList'><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_BFB_coarse_res_gfortran_test/Jenkinsfile</affectedPath><commitId>58cafea0f5f9b03d3009fb4168af9d4fd5a709c2</commitId><timestamp>1729717665000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>The BFBness tests can now run on any machine.
</comment><date>2024-10-23 16:07:45 -0500</date><id>58cafea0f5f9b03d3009fb4168af9d4fd5a709c2</id><msg>The BFBness tests can now run on any machine.</msg><path><editType>edit</editType><file>jenkins_tests/cam_BFB_coarse_res_gfortran_test/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_scam_ifort_ncar_plot/Jenkinsfile</affectedPath><commitId>29585d8f8e138192e8385d6e62bb3515be33d2df</commitId><timestamp>1729719091000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Update to work with new plot location in /home/pub
</comment><date>2024-10-23 16:31:31 -0500</date><id>29585d8f8e138192e8385d6e62bb3515be33d2df</id><msg>Update to work with new plot location in /home/pub</msg><path><editType>edit</editType><file>jenkins_tests/cam_scam_ifort_ncar_plot/Jenkinsfile</file></path></item><item _class='hudson.plugins.git.GitChangeSet'><affectedPath>jenkins_tests/cam_scam_ifort_ncar_plot/Jenkinsfile</affectedPath><affectedPath>jenkins_tests/cam_plot_scam_ifort/Jenkinsfile</affectedPath><commitId>f6318d0b524cf667ef008f22ef15c3f4e2e10c34</commitId><timestamp>1729721474000</timestamp><author><absoluteUrl>http://carson.math.uwm.edu/jenkins/user/huebler</absoluteUrl><fullName>Gunther Huebler</fullName></author><authorEmail>huebler@uwm.edu</authorEmail><comment>Renaming test and making it use new script location.
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