Shell Script Console

Status
Console Output
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ ulimit -s 8388608
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/cam_BFB_coarse_res_gfortran_test_config
Build script /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/libraries/FTorch/buildlib for component FTorch not found.
submit_jobs case.run
Submit job case.run
Exception from case_run: ERROR: RUN FAIL: Command 'mpirun  -np 16 /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_FHISTC_MTso_cam7_ne3pg3_ne3pg3_mg37_larson-group_gnu/bld/cesm.exe   >> cesm.log.$LID 2>&1 ' failed
See log file for details: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_FHISTC_MTso_cam7_ne3pg3_ne3pg3_mg37_larson-group_gnu/run/cesm.log.260908-034306
Build script /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/libraries/FTorch/buildlib for component FTorch not found.
submit_jobs case.run
Submit job case.run
Exception from case_run: ERROR: RUN FAIL: Command 'mpirun  -np 16 /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_FHISTC_MTso_cam7_ne3pg3_ne3pg3_mg37_larson-group_gnu/bld/cesm.exe   >> cesm.log.$LID 2>&1 ' failed
See log file for details: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_FHISTC_MTso_cam7_ne3pg3_ne3pg3_mg37_larson-group_gnu/run/cesm.log.260908-034622
-------- Variable Diff Summary -------- 
File 1: 87a1a1aa0120eadc31a4ecf3cbe828e48851abd6
File 2: 4b376f0bf8316be71a31bac727c6faca2af18737

Variables discovered (union): 1724
Variables present in both files: 1724
Variables only in file 1: 0
Variables only in file 2: 0
Variables with differences (all dimensions): 0
Variables identical (all dimensions): 1724

Variables all-zero in file 1 (actual data): 131
Variables all-zero in file 2 (actual data): 131
Variables all-zero in both files (actual data): 131

3D variables tested (PASS/FAIL basis): 0
3D variables with differences: 0
3D variables identical: 0
3D variables all-zero in both files (actual data): 0

Variables skipped for PASS/FAIL (not 3D in either file): 1724

PASS: No differences found in 3D variables.

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test
Checking specified repo: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test

Using /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test with origin https://github.com/larson-group/cam.git

Output Save Mode: none

Using branch: clubb_silhs_devel

Making list from 'UnresolvedCommits':
	- 057591de860e03dfa87c5b28ab0a38e2b92cec0f

CheckRange = False: only comparing baseline to final commit.

Run Output Path: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_FHISTC_MTso_cam7_ne3pg3_ne3pg3_mg37_larson-group_gnu/run/subcol_SILHS_UWM_debug_FHISTC_MTso_cam7_ne3pg3_ne3pg3_mg37_larson-group_gnu.cam.rh0.1979-01-02-00000.nc

Run commands: ['run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/subcol_SILHS_UWM_debug_FHISTC_MTso_cam7_ne3pg3_ne3pg3_mg37_larson-group_gnu --reuse_build --silhs 4 .', '\nrun_scripts/run_cesm_uwm_coarse_res.sh']

Diffing command: python3 run_scripts/netcdf_3D_vars_diff.py

=============================== Running Test ===============================

Parsing message from commit: 87a1a1aa0120eadc31a4ecf3cbe828e48851abd6
	Found: RESOLVED:900681c91bdbdf8d6cd069bab01663ebac1a3279
WARNING: improper RESOLVED message 'RESOLVED:900681c91bdbdf8d6cd069bab01663ebac1a3279'
Most likely, '900681c91bdbdf8d6cd069bab01663ebac1a3279' is not a valid hash.

Checking Commit: 87a1a1aa0120eadc31a4ecf3cbe828e48851abd6
	Running: final commit to check, not labelled BIT_CHANGING
	Checking out 87a1a1aa0120eadc31a4ecf3cbe828e48851abd6
	Running: 'run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/subcol_SILHS_UWM_debug_FHISTC_MTso_cam7_ne3pg3_ne3pg3_mg37_larson-group_gnu --reuse_build --silhs 4 .'
	Running: 'run_scripts/run_cesm_uwm_coarse_res.sh'
	Checking out 4b376f0bf8316be71a31bac727c6faca2af18737
	Running: 'run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/subcol_SILHS_UWM_debug_FHISTC_MTso_cam7_ne3pg3_ne3pg3_mg37_larson-group_gnu --reuse_build --silhs 4 .'
	Running: 'run_scripts/run_cesm_uwm_coarse_res.sh'
	Diffing: 'python3 run_scripts/netcdf_3D_vars_diff.py 87a1a1aa0120eadc31a4ecf3cbe828e48851abd6 4b376f0bf8316be71a31bac727c6faca2af18737'

=============================== Test Results ===============================

Commit Range Checked = 4b376f0bf8316be71a31bac727c6faca2af18737...87a1a1aa0120eadc31a4ecf3cbe828e48851abd6
-- CheckRange was set to False, no intermediate commits checked

No new Unresolved commits found.

No fake BIT_CHANGING commits found.

Remaining Unresolved Commits (oldest commit is listed first):
	057591de860e03dfa87c5b28ab0a38e2b92cec0f

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 057591de860e03dfa87c5b28ab0a38e2b92cec0f


Saving into BaselineCommit: 87a1a1aa0120eadc31a4ecf3cbe828e48851abd6

=============================== Cleanup ===============================

Removing all generated output
	REMOVING: 4b376f0bf8316be71a31bac727c6faca2af18737
	REMOVING: 87a1a1aa0120eadc31a4ecf3cbe828e48851abd6

================== Unresolved Commit Status ==================

Remaining Unresolved Commits (oldest commit is listed first):
	057591de860e03dfa87c5b28ab0a38e2b92cec0f

Exiting with code: 1