Started by user <a href='/jenkins/user/huebler' class='jenkins-table__link model-link model-link--float'>Gunther Huebler</a>
Obtained jenkins_tests/cam_BFB_coarse_res_gfortran_test/Jenkinsfile from git <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
<span class="pipeline-new-node" nodeId="2" startId="2">[Pipeline] Start of Pipeline
</span><span class="pipeline-new-node" nodeId="3" startId="3" enclosingId="2">[Pipeline] node
</span><span class="pipeline-node-3">Running on <a href='/jenkins/computer/(built-in)/' class='jenkins-table__link model-link model-link--float'>Jenkins</a> in /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test
</span><span class="pipeline-new-node" nodeId="4" startId="4" enclosingId="3">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="5" startId="5" enclosingId="4">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="6" startId="6" enclosingId="5" label="Declarative: Checkout SCM">[Pipeline] { (Declarative: Checkout SCM)
</span><span class="pipeline-new-node" nodeId="7" enclosingId="6">[Pipeline] checkout
</span><span class="pipeline-node-7">The recommended git tool is: git
 &gt; git rev-parse --resolve-git-dir /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/.git # timeout=10
Fetching changes from the remote Git repository
 &gt; git config remote.origin.url <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> # timeout=10
Cleaning workspace
 &gt; git rev-parse --verify HEAD # timeout=10
Resetting working tree
 &gt; git reset --hard # timeout=10
 &gt; git clean -ffdx # timeout=10
Fetching upstream changes from <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.34.1'
 &gt; git fetch --tags --force --progress -- <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
 &gt; git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision fd0ac9c976c9d74ec57367f8ff82d0598da11733 (refs/remotes/origin/clubb_silhs_devel)
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f fd0ac9c976c9d74ec57367f8ff82d0598da11733 # timeout=10
Commit message: "Fixing name"
 &gt; git rev-list --no-walk fd0ac9c976c9d74ec57367f8ff82d0598da11733 # timeout=10
</span><span class="pipeline-new-node" nodeId="8" startId="6">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="9" startId="5">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="10" startId="10" enclosingId="4">[Pipeline] withEnv
</span><span class="pipeline-new-node" nodeId="11" startId="11" enclosingId="10">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="12" startId="12" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="13" startId="13" enclosingId="12" label="Update sys_admin Repo">[Pipeline] { (Update sys_admin Repo)
</span><span class="pipeline-new-node" nodeId="14" enclosingId="13">[Pipeline] sh
</span><span class="pipeline-node-14">+ git -C /home/pub/jenkins_BFB_test_configs/sys_admin pull
Already up to date.
</span><span class="pipeline-new-node" nodeId="15" startId="13">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="16" startId="12">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="17" startId="17" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="18" startId="18" enclosingId="17" label="Run Python Test">[Pipeline] { (Run Python Test)
</span><span class="pipeline-new-node" nodeId="19" enclosingId="18">[Pipeline] sh
</span><span class="pipeline-node-19">+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37
+ ulimit -s 8388608
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/cam_BFB_coarse_res_gfortran_test_config
repo/run_scripts/run_cesm_uwm_coarse_res.sh: line 31: cd: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/repo/cime/scripts: No such file or directory
repo/run_scripts/run_cesm_uwm_coarse_res.sh: line 32: ./create_newcase: No such file or directory
Error creating new case
m_uwm_coarse_res.sh: line 31: cd: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/repo/cime/scripts: No such file or directory
repo/run_scripts/run_cesm_uwm_coarse_res.sh: line 32: ./create_newcase: No such file or directory
Error creating new case
m_uwm_coarse_res.sh: line 31: cd: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/repo/cime/scripts: No such file or directory
repo/run_scripts/run_cesm_uwm_coarse_res.sh: line 32: ./create_newcase: No such file or directory

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test
Trying to clone repo...

Cloned repo location: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test/repo

Output Save Mode: none

Using branch: clubb_silhs_devel

Making list from 'UnresolvedCommits':
	- 12b863486054c9a0147fa01a8e29763715f5e164
	- fd0ac9c976c9d74ec57367f8ff82d0598da11733

Run Output Path: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc

Run commands: ['rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37', '\nrepo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo', '\nrepo/run_scripts/run_cesm_uwm_coarse_res.sh']

Diffing command: python3 repo/run_scripts/netcdf_3D_vars_diff.py

=============================== Running Test ===============================

Parsing message from commit: 12b863486054c9a0147fa01a8e29763715f5e164
Parsing message from commit: fd0ac9c976c9d74ec57367f8ff82d0598da11733

Checking Commit: 12b863486054c9a0147fa01a8e29763715f5e164
	Skipping: not final commit and not labelled BIT_CHANGING

Checking Commit: fd0ac9c976c9d74ec57367f8ff82d0598da11733
	Running: final commit to check, not labelled BIT_CHANGING
	Checking out fd0ac9c976c9d74ec57367f8ff82d0598da11733
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'

================== WARNING ==================
Commit:  fd0ac9c976c9d74ec57367f8ff82d0598da11733

There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc

The run will continue, and this commit will be
considered unresolved.
===========================================
	Checking out e3ee84a0d729747f28492dee973502674281cb0c
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'

================== WARNING ==================
Commit:  e3ee84a0d729747f28492dee973502674281cb0c

There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc

The run will continue, and this commit will be
considered unresolved.
===========================================
	ISSUE WITH COMMIT DETECTED: fd0ac9c976c9d74ec57367f8ff82d0598da11733 differs from e3ee84a0d729747f28492dee973502674281cb0c

Finding all BIT_CHANGING commits in range: e3ee84a0d729747f28492dee973502674281cb0c...fd0ac9c976c9d74ec57367f8ff82d0598da11733
	Checking out 12b863486054c9a0147fa01a8e29763715f5e164
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'

================== WARNING ==================
Commit:  12b863486054c9a0147fa01a8e29763715f5e164

There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc

The run will continue, and this commit will be
considered unresolved.
===========================================
	Commit e3ee84a0d729747f28492dee973502674281cb0c already failed. Will not run again
	Commit fd0ac9c976c9d74ec57367f8ff82d0598da11733 already failed. Will not run again
	Commit 12b863486054c9a0147fa01a8e29763715f5e164 already failed. Will not run again
	Found:
		12b863486054c9a0147fa01a8e29763715f5e164
		fd0ac9c976c9d74ec57367f8ff82d0598da11733

=============================== Test Results ===============================

Commit Range Checked = e3ee84a0d729747f28492dee973502674281cb0c...fd0ac9c976c9d74ec57367f8ff82d0598da11733

New Unresolved Commits:
	12b863486054c9a0147fa01a8e29763715f5e164
	fd0ac9c976c9d74ec57367f8ff82d0598da11733

No fake BIT_CHANGING commits found.

Remaining Unresolved Commits (oldest commit is listed first):
	12b863486054c9a0147fa01a8e29763715f5e164
	fd0ac9c976c9d74ec57367f8ff82d0598da11733

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 12b863486054c9a0147fa01a8e29763715f5e164
fd0ac9c976c9d74ec57367f8ff82d0598da11733

Ignoring fd0ac9c976c9d74ec57367f8ff82d0598da11733 since it failed to produce output.
Ignoring 12b863486054c9a0147fa01a8e29763715f5e164 since it failed to produce output.

=============================== Cleanup ===============================

Removed repo.

Removing all generated output

================== Unresolved Commit Status ==================

Remaining Unresolved Commits (oldest commit is listed first):
	12b863486054c9a0147fa01a8e29763715f5e164
	fd0ac9c976c9d74ec57367f8ff82d0598da11733

================== FAILED Commits ==================

These are the commits which entirely failed to produce output: 
	fd0ac9c976c9d74ec57367f8ff82d0598da11733
	e3ee84a0d729747f28492dee973502674281cb0c
	12b863486054c9a0147fa01a8e29763715f5e164

Exiting with code: 1
</span><span class="pipeline-new-node" nodeId="20" startId="18">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="21" startId="17">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="22" startId="22" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="23" startId="23" enclosingId="22" label="Declarative: Post Actions">[Pipeline] { (Declarative: Post Actions)
</span><span class="pipeline-new-node" nodeId="24" startId="24" enclosingId="23">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="25" startId="25" enclosingId="24">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="26" enclosingId="25">[Pipeline] sh
</span><span class="pipeline-node-26">+ chmod -R 755 /home/jenkins/cam_output
</span><span class="pipeline-new-node" nodeId="27" startId="25">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="28" startId="24">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="29" startId="29" enclosingId="23">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="30" startId="30" enclosingId="29">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="31" enclosingId="30">[Pipeline] emailext
</span><span class="pipeline-node-31">Sending email to: messnermet@uwm.edu
</span><span class="pipeline-new-node" nodeId="32" startId="30">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="33" startId="29">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="34" startId="23">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="35" startId="22">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="36" startId="11">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="37" startId="10">[Pipeline] // withEnv
</span><span class="pipeline-new-node" nodeId="38" startId="4">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="39" startId="3">[Pipeline] // node
</span><span class="pipeline-new-node" nodeId="40" startId="2">[Pipeline] End of Pipeline
</span>ERROR: script returned exit code 1
Finished: FAILURE