Started by an SCM change
Obtained jenkins_tests/cam_coarse_res_bin_diff_regression_gfortran_test/Jenkinsfile from git <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
<span class="pipeline-new-node" nodeId="2" startId="2">[Pipeline] Start of Pipeline
</span><span class="pipeline-new-node" nodeId="3" startId="3" enclosingId="2">[Pipeline] node
</span><span class="pipeline-node-3">Running on <a href='/jenkins/computer/(built-in)/' class='jenkins-table__link model-link model-link--float'>Jenkins</a> in /home/jenkins/workspace/cam_coarse_res_bin_diff_regression_gfortran_test
</span><span class="pipeline-new-node" nodeId="4" startId="4" enclosingId="3">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="5" startId="5" enclosingId="4">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="6" startId="6" enclosingId="5" label="Declarative: Checkout SCM">[Pipeline] { (Declarative: Checkout SCM)
</span><span class="pipeline-new-node" nodeId="7" enclosingId="6">[Pipeline] checkout
</span><span class="pipeline-node-7">The recommended git tool is: git
Cloning the remote Git repository
Cloning repository <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
 &gt; git init /home/jenkins/workspace/cam_coarse_res_bin_diff_regression_gfortran_test # timeout=10
Fetching upstream changes from <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.34.1'
 &gt; git fetch --tags --force --progress -- <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
 &gt; git config remote.origin.url <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> # timeout=10
 &gt; git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 &gt; git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision c26d4422b4325a4b592a93dc92e93bb70adf84b0 (refs/remotes/origin/clubb_silhs_devel)
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f c26d4422b4325a4b592a93dc92e93bb70adf84b0 # timeout=10
Commit message: "Autoupdated SILHS Commit d423046c547ffa8af68ce4faa8d77a8476e4f887 Author: st3113n Date: Fri Oct 4 09:08:24 2024 -0500 refactoring to remove compiler warnings (#1187) * refactor code to remove warnings for exceeding 100 characters per line"
 &gt; git rev-list --no-walk dabbf904b1ae020619366b1720c2ae531de0370c # timeout=10
</span><span class="pipeline-new-node" nodeId="8" startId="6">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="9" startId="5">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="10" startId="10" enclosingId="4">[Pipeline] withEnv
</span><span class="pipeline-new-node" nodeId="11" startId="11" enclosingId="10">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="12" startId="12" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="13" startId="13" enclosingId="12" label="Clone SysAdmin to tmp">[Pipeline] { (Clone SysAdmin to tmp)
</span><span class="pipeline-new-node" nodeId="14" enclosingId="13">[Pipeline] sh
</span><span class="pipeline-node-14">+ rm -rf /home/jenkins/cam_bit_diff_test_workspace/sys_admin
+ git clone <a href='https://github.com/larson-group/sys_admin.git'>https://github.com/larson-group/sys_admin.git</a> /home/jenkins/cam_bit_diff_test_workspace/sys_admin
Cloning into '/home/jenkins/cam_bit_diff_test_workspace/sys_admin'...
</span><span class="pipeline-new-node" nodeId="15" startId="13">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="16" startId="12">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="17" startId="17" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="18" startId="18" enclosingId="17" label="Run Python Test">[Pipeline] { (Run Python Test)
</span><span class="pipeline-new-node" nodeId="19" enclosingId="18">[Pipeline] sh
</span><span class="pipeline-node-19">+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37
+ ulimit -s 8388608
+ python3 /home/jenkins/cam_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/cam_bit_diff_test_workspace/bit_diff_cam_config
ERROR: Unknown Job Queue specified use --force to set
Error: There is no specific subroutine for the generic 'advance_clubb_core_api' at (1)

Error: Type mismatch in argument 'nzmax' at (1); passed REAL(8) to INTEGER(4)

Error: Type mismatch in argument 'params' at (1); passed LOGICAL(4) to REAL(8)

Error: Type mismatch in argument 'l_input_fields' at (1); passed TYPE(clubb_config_flags_type) to LOGICAL(4)

Error: Type mismatch in argument 'clubb_config_flags' at (1); passed INTEGER(4) to TYPE(clubb_config_flags_type)

ERROR: BUILD FAIL: cam.buildlib failed, cat /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/bld/atm.bldlog.241005-031359
Error building CAM
Queue specified use --force to set
submit_jobs case.run
Submit job case.run
No timing file found in run directory
check for resubmit
dout_s False 
mach larson-group 
resubmit_num 0
ERROR: Unknown Job Queue specified use --force to set
Error: There is no specific subroutine for the generic 'generate_silhs_sample_api' at (1)

Error: There is no specific subroutine for the generic 'clip_transform_silhs_output_api' at (1)

ERROR: BUILD FAIL: cam.buildlib failed, cat /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/bld/atm.bldlog.241005-033145
Error building CAM
Queue specified use --force to set
submit_jobs case.run
Submit job case.run
No timing file found in run directory
check for resubmit
dout_s False 
mach larson-group 
resubmit_num 0

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/cam_bit_diff_test_workspace
Trying to clone repo...

Cloned repo location: /home/jenkins/cam_bit_diff_test_workspace/repo

Output Save Mode: none

Using branch: clubb_silhs_devel

Making list from 'UnresolvedCommits':

Run Output Path: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc

Run commands: ['rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37', '\nrepo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo', '\nrepo/run_scripts/run_cesm_uwm_coarse_res.sh']

Diffing command: python3 repo/run_scripts/netcdf_3D_vars_diff.py

=============================== Running Test ===============================

Parsing message from commit: 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
Parsing message from commit: 37f9c23a4355a8135ddb74229cd970da02959130
	Found: BIT_CHANGING
Parsing message from commit: c26d4422b4325a4b592a93dc92e93bb70adf84b0

Checking Commit: 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
	Skipping: not final commit and not labelled BIT_CHANGING

Checking Commit: 37f9c23a4355a8135ddb74229cd970da02959130
	Checking out 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'

================== WARNING ==================
Commit:  07ecf4a3bc8df6091e7820434d4ccc473e5dcb05

There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc

The run will continue, and this commit will be
considered unresolved.
===========================================
	Checking out dabbf904b1ae020619366b1720c2ae531de0370c
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
	ISSUE WITH COMMIT DETECTED: 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05 differs from dabbf904b1ae020619366b1720c2ae531de0370c
	Checking out 37f9c23a4355a8135ddb74229cd970da02959130
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'

================== WARNING ==================
Commit:  37f9c23a4355a8135ddb74229cd970da02959130

There was a problem copying the output.
Did the run complete?
Is the output path correct? /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc

The run will continue, and this commit will be
considered unresolved.
===========================================
	Commit 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05 already failed. Will not run again
	Commit '37f9c23a4355a8135ddb74229cd970da02959130' is BIT_CHANGING and properly labelled as such.

Checking Commit: c26d4422b4325a4b592a93dc92e93bb70adf84b0
	Running: final commit to check, not labelled BIT_CHANGING
	Checking out c26d4422b4325a4b592a93dc92e93bb70adf84b0
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
	Commit 37f9c23a4355a8135ddb74229cd970da02959130 already failed. Will not run again
	ISSUE WITH COMMIT DETECTED: c26d4422b4325a4b592a93dc92e93bb70adf84b0 differs from 37f9c23a4355a8135ddb74229cd970da02959130

Finding all BIT_CHANGING commits in range: dabbf904b1ae020619366b1720c2ae531de0370c...07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
	Commit 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05 already failed. Will not run again
	Output from dabbf904b1ae020619366b1720c2ae531de0370c already saved
	Found:
		07ecf4a3bc8df6091e7820434d4ccc473e5dcb05

Finding all BIT_CHANGING commits in range: 37f9c23a4355a8135ddb74229cd970da02959130...c26d4422b4325a4b592a93dc92e93bb70adf84b0
	Output from c26d4422b4325a4b592a93dc92e93bb70adf84b0 already saved
	Commit 37f9c23a4355a8135ddb74229cd970da02959130 already failed. Will not run again
	Found:
		c26d4422b4325a4b592a93dc92e93bb70adf84b0

=============================== Test Results ===============================

Commit Range Checked = dabbf904b1ae020619366b1720c2ae531de0370c...c26d4422b4325a4b592a93dc92e93bb70adf84b0

New Unresolved Commits:
	07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
	c26d4422b4325a4b592a93dc92e93bb70adf84b0

No fake BIT_CHANGING commits found.

Remaining Unresolved Commits (oldest commit is listed first):
	07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
	c26d4422b4325a4b592a93dc92e93bb70adf84b0

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
c26d4422b4325a4b592a93dc92e93bb70adf84b0


Saving into BaselineCommit: c26d4422b4325a4b592a93dc92e93bb70adf84b0

=============================== Cleanup ===============================

Removed repo.

Removing all generated output
	REMOVING: dabbf904b1ae020619366b1720c2ae531de0370c
	REMOVING: c26d4422b4325a4b592a93dc92e93bb70adf84b0

================== Unresolved Commit Status ==================

Remaining Unresolved Commits (oldest commit is listed first):
	07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
	c26d4422b4325a4b592a93dc92e93bb70adf84b0

================== FAILED Commits ==================

These are the commits which entirely failed to produce output: 
	07ecf4a3bc8df6091e7820434d4ccc473e5dcb05
	37f9c23a4355a8135ddb74229cd970da02959130

Exiting with code: 1
</span><span class="pipeline-new-node" nodeId="20" startId="18">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="21" startId="17">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="22" startId="22" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="23" startId="23" enclosingId="22" label="Declarative: Post Actions">[Pipeline] { (Declarative: Post Actions)
</span><span class="pipeline-new-node" nodeId="24" startId="24" enclosingId="23">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="25" startId="25" enclosingId="24">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="26" enclosingId="25">[Pipeline] cleanWs
</span><span class="pipeline-node-26">[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
</span><span class="pipeline-new-node" nodeId="27" enclosingId="25">[Pipeline] sh
</span><span class="pipeline-node-27">+ chmod -R 755 /home/jenkins/cam_output
</span><span class="pipeline-new-node" nodeId="28" startId="25">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="29" startId="24">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="30" startId="30" enclosingId="23">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="31" startId="31" enclosingId="30">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="32" enclosingId="31">[Pipeline] emailext
</span><span class="pipeline-node-32">Sending email to: messnermet@uwm.edu
</span><span class="pipeline-new-node" nodeId="33" startId="31">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="34" startId="30">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="35" startId="23">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="36" startId="22">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="37" startId="11">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="38" startId="10">[Pipeline] // withEnv
</span><span class="pipeline-new-node" nodeId="39" startId="4">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="40" startId="3">[Pipeline] // node
</span><span class="pipeline-new-node" nodeId="41" startId="2">[Pipeline] End of Pipeline
</span>ERROR: script returned exit code 1
Finished: FAILURE