Started by user <a href='/jenkins/user/huebler' class='jenkins-table__link model-link model-link--float'>Gunther Huebler</a>
Obtained jenkins_tests/cam_coarse_res_bin_diff_regression_gfortran_test/Jenkinsfile from git <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
<span class="pipeline-new-node" nodeId="2" startId="2">[Pipeline] Start of Pipeline
</span><span class="pipeline-new-node" nodeId="3" startId="3" enclosingId="2">[Pipeline] node
</span><span class="pipeline-node-3">Running on <a href='/jenkins/computer/(built-in)/' class='jenkins-table__link model-link model-link--float'>Jenkins</a> in /home/jenkins/workspace/cam_coarse_res_bin_diff_regression_gfortran_test
</span><span class="pipeline-new-node" nodeId="4" startId="4" enclosingId="3">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="5" startId="5" enclosingId="4">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="6" startId="6" enclosingId="5" label="Declarative: Checkout SCM">[Pipeline] { (Declarative: Checkout SCM)
</span><span class="pipeline-new-node" nodeId="7" enclosingId="6">[Pipeline] checkout
</span><span class="pipeline-node-7">The recommended git tool is: git
Cloning the remote Git repository
Cloning repository <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
 &gt; git init /home/jenkins/workspace/cam_coarse_res_bin_diff_regression_gfortran_test # timeout=10
Fetching upstream changes from <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.34.1'
 &gt; git fetch --tags --force --progress -- <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
 &gt; git config remote.origin.url <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> # timeout=10
 &gt; git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 &gt; git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision 0df34e02ef1da89d9c0d413f6c5a48decad55564 (refs/remotes/origin/clubb_silhs_devel)
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f 0df34e02ef1da89d9c0d413f6c5a48decad55564 # timeout=10
Commit message: "Autoupdated SILHS Commit 8bbf5db087f49e4d6a4a1aaef2b825b3716276f8 Author: Gunther Huebler Date: Wed Sep 25 14:42:58 2024 -0500 Removing the target attributes wherever possible. These are artifacts from when gr and the the stats types were globals, and got naively copied when these were pushed through the call stack."
 &gt; git rev-list --no-walk 0df34e02ef1da89d9c0d413f6c5a48decad55564 # timeout=10
</span><span class="pipeline-new-node" nodeId="8" startId="6">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="9" startId="5">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="10" startId="10" enclosingId="4">[Pipeline] withEnv
</span><span class="pipeline-new-node" nodeId="11" startId="11" enclosingId="10">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="12" startId="12" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="13" startId="13" enclosingId="12" label="Clone SysAdmin to tmp">[Pipeline] { (Clone SysAdmin to tmp)
</span><span class="pipeline-new-node" nodeId="14" enclosingId="13">[Pipeline] sh
</span><span class="pipeline-node-14">+ rm -rf /home/jenkins/cam_bit_diff_test_workspace/sys_admin
+ git clone <a href='https://github.com/larson-group/sys_admin.git'>https://github.com/larson-group/sys_admin.git</a> /home/jenkins/cam_bit_diff_test_workspace/sys_admin
Cloning into '/home/jenkins/cam_bit_diff_test_workspace/sys_admin'...
</span><span class="pipeline-new-node" nodeId="15" startId="13">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="16" startId="12">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="17" startId="17" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="18" startId="18" enclosingId="17" label="Run Python Test">[Pipeline] { (Run Python Test)
</span><span class="pipeline-new-node" nodeId="19" enclosingId="18">[Pipeline] sh
</span><span class="pipeline-node-19">+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37
+ python3 /home/jenkins/cam_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/cam_bit_diff_test_workspace/bit_diff_cam_config
ERROR: Unknown Job Queue specified use --force to set
submit_jobs case.run
Submit job case.run
No timing file found in run directory
check for resubmit
dout_s False 
mach larson-group 
resubmit_num 0
ERROR: Unknown Job Queue specified use --force to set
ERROR: Command /home/jenkins/cam_bit_diff_test_workspace/repo/components/clm/bld/build-namelist failed rc=255
out=
err=ERROR : CLM build-namelist::CLMBuildNamelist::add_default() : No default value found for fsurdat.
            Are defaults provided for this resolution and land mask?
Error building CAM
 vars are zero.

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/cam_bit_diff_test_workspace
Trying to clone repo...

Cloned repo location: /home/jenkins/cam_bit_diff_test_workspace/repo

Output Save Mode: none

Using branch: clubb_silhs_devel

Making list from 'UnresolvedCommits':

Run Output Path: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37_larson-group_gnu/run/subcol_SILHS_UWM_debug_f10_f10_mg37_larson-group_gnu.cam.rh0.0001-01-02-00000.nc

Run commands: ['rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37', '\nrepo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo', '\nrepo/run_scripts/run_cesm_uwm_coarse_res.sh']

Diffing command: python3 repo/run_scripts/netcdf_3D_vars_diff.py

=============================== Running Test ===============================

Parsing message from commit: 44185129c9d82fc7c19c5c28d3b2da9f5b13953b
Parsing message from commit: f91e6aab06416ab175dd76caed4107fd7b3fc47a
Parsing message from commit: 0df34e02ef1da89d9c0d413f6c5a48decad55564

Checking Commit: 44185129c9d82fc7c19c5c28d3b2da9f5b13953b
	Skipping: not final commit and not labelled BIT_CHANGING

Checking Commit: f91e6aab06416ab175dd76caed4107fd7b3fc47a
	Skipping: not final commit and not labelled BIT_CHANGING

Checking Commit: 0df34e02ef1da89d9c0d413f6c5a48decad55564
	Running: final commit to check, not labelled BIT_CHANGING
	Checking out 0df34e02ef1da89d9c0d413f6c5a48decad55564
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
	Checking out d3f2154471a92d60cbd4a9a3edc0c6933d817038
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
	Diffing: 'python3 repo/run_scripts/netcdf_3D_vars_diff.py 0df34e02ef1da89d9c0d413f6c5a48decad55564 d3f2154471a92d60cbd4a9a3edc0c6933d817038'

=============================== Test Results ===============================

Commit Range Checked = d3f2154471a92d60cbd4a9a3edc0c6933d817038...0df34e02ef1da89d9c0d413f6c5a48decad55564

No new Unresolved commits found.

No fake BIT_CHANGING commits found.

No remaining Unresolved Commits.

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 

Saving into BaselineCommit: 0df34e02ef1da89d9c0d413f6c5a48decad55564

=============================== Cleanup ===============================

Removed repo.

Removing all generated output
	REMOVING: d3f2154471a92d60cbd4a9a3edc0c6933d817038
	REMOVING: 0df34e02ef1da89d9c0d413f6c5a48decad55564

================== Unresolved Commit Status ==================

No remaining Unresolved Commits.

Exiting with code: 0
</span><span class="pipeline-new-node" nodeId="20" startId="18">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="21" startId="17">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="22" startId="22" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="23" startId="23" enclosingId="22" label="Declarative: Post Actions">[Pipeline] { (Declarative: Post Actions)
</span><span class="pipeline-new-node" nodeId="24" startId="24" enclosingId="23">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="25" startId="25" enclosingId="24">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="26" enclosingId="25">[Pipeline] cleanWs
</span><span class="pipeline-node-26">[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
</span><span class="pipeline-new-node" nodeId="27" enclosingId="25">[Pipeline] sh
</span><span class="pipeline-node-27">+ chmod -R 755 /home/jenkins/cam_output
</span><span class="pipeline-new-node" nodeId="28" startId="25">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="29" startId="24">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="30" startId="23">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="31" startId="22">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="32" startId="11">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="33" startId="10">[Pipeline] // withEnv
</span><span class="pipeline-new-node" nodeId="34" startId="4">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="35" startId="3">[Pipeline] // node
</span><span class="pipeline-new-node" nodeId="36" startId="2">[Pipeline] End of Pipeline
</span>Finished: SUCCESS