Started by an SCM change
Obtained jenkins_tests/cam_coarse_res_bin_diff_regression_gfortran_test/Jenkinsfile from git <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
<span class="pipeline-new-node" nodeId="2" startId="2">[Pipeline] Start of Pipeline
</span><span class="pipeline-new-node" nodeId="3" startId="3" enclosingId="2">[Pipeline] node
</span><span class="pipeline-node-3">Running on <a href='/jenkins/computer/(built-in)/' class='jenkins-table__link model-link model-link--float'>Jenkins</a> in /home/jenkins/workspace/cam_coarse_res_bin_diff_regression_gfortran_test
</span><span class="pipeline-new-node" nodeId="4" startId="4" enclosingId="3">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="5" startId="5" enclosingId="4">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="6" startId="6" enclosingId="5" label="Declarative: Checkout SCM">[Pipeline] { (Declarative: Checkout SCM)
</span><span class="pipeline-new-node" nodeId="7" enclosingId="6">[Pipeline] checkout
</span><span class="pipeline-node-7">The recommended git tool is: git
Cloning the remote Git repository
Cloning repository <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
 &gt; git init /home/jenkins/workspace/cam_coarse_res_bin_diff_regression_gfortran_test # timeout=10
Fetching upstream changes from <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.34.1'
 &gt; git fetch --tags --force --progress -- <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
 &gt; git config remote.origin.url <a href='https://github.com/larson-group/cam.git'>https://github.com/larson-group/cam.git</a> # timeout=10
 &gt; git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 &gt; git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision 8cc633ec5c668b87b76afb3cbedac29732fdcc9d (refs/remotes/origin/clubb_silhs_devel)
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f 8cc633ec5c668b87b76afb3cbedac29732fdcc9d # timeout=10
Commit message: "Autoupdated SILHS Commit bf54ede1394cb1706dac50e463e7907036e71ade Author: st3113n Date: Tue Sep 24 14:02:31 2024 -0500 reduce compiler warnings (#1180) * refactor code to remove warnings for exceeding 100 characters per line"
 &gt; git rev-list --no-walk 0ab6cf98477cf6a49c01e346f9e733ebdf4f5605 # timeout=10
</span><span class="pipeline-new-node" nodeId="8" startId="6">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="9" startId="5">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="10" startId="10" enclosingId="4">[Pipeline] withEnv
</span><span class="pipeline-new-node" nodeId="11" startId="11" enclosingId="10">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="12" startId="12" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="13" startId="13" enclosingId="12" label="Clone SysAdmin to tmp">[Pipeline] { (Clone SysAdmin to tmp)
</span><span class="pipeline-new-node" nodeId="14" enclosingId="13">[Pipeline] sh
</span><span class="pipeline-node-14">+ rm -rf /home/jenkins/cam_bit_diff_test_workspace/sys_admin
+ git clone <a href='https://github.com/larson-group/sys_admin.git'>https://github.com/larson-group/sys_admin.git</a> /home/jenkins/cam_bit_diff_test_workspace/sys_admin
Cloning into '/home/jenkins/cam_bit_diff_test_workspace/sys_admin'...
</span><span class="pipeline-new-node" nodeId="15" startId="13">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="16" startId="12">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="17" startId="17" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="18" startId="18" enclosingId="17" label="Run Python Test">[Pipeline] { (Run Python Test)
</span><span class="pipeline-new-node" nodeId="19" enclosingId="18">[Pipeline] sh
</span><span class="pipeline-node-19">+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37
+ python3 /home/jenkins/cam_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/cam_bit_diff_test_workspace/bit_diff_cam_config
ERROR: Unknown Job Queue specified use --force to set
submit_jobs case.run
Submit job case.run
No timing file found in run directory
check for resubmit
dout_s False 
mach larson-group 
resubmit_num 0
ERROR: Unknown Job Queue specified use --force to set
submit_jobs case.run
Submit job case.run
No timing file found in run directory
check for resubmit
dout_s False 
mach larson-group 
resubmit_num 0
PASS: All 3D output vars are zero.

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/cam_bit_diff_test_workspace
Trying to clone repo...

Cloned repo location: /home/jenkins/cam_bit_diff_test_workspace/repo

Output Save Mode: none

Using branch: clubb_silhs_devel

Making list from 'UnresolvedCommits':

Run Output Path: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37_larson-group_gnu/run/subcol_SILHS_UWM_debug_f10_f10_mg37_larson-group_gnu.cam.rh0.0001-01-02-00000.nc

Run commands: ['rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37', '\nrepo/run_scripts/set_up_cam_coarse_res.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo', '\nrepo/run_scripts/run_cesm_uwm_coarse_res.sh']

Diffing command: python3 repo/run_scripts/netcdf_3D_vars_diff.py

=============================== Running Test ===============================

Parsing message from commit: 5190f0d4f5c25118bdeda370219f31e78a72dcfe
Parsing message from commit: 8cc633ec5c668b87b76afb3cbedac29732fdcc9d

Checking Commit: 5190f0d4f5c25118bdeda370219f31e78a72dcfe
	Skipping: not final commit and not labelled BIT_CHANGING

Checking Commit: 8cc633ec5c668b87b76afb3cbedac29732fdcc9d
	Running: final commit to check, not labelled BIT_CHANGING
	Checking out 8cc633ec5c668b87b76afb3cbedac29732fdcc9d
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_cam_coarse_res.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
	Checking out 0ab6cf98477cf6a49c01e346f9e733ebdf4f5605
	Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37'
	Running: '
repo/run_scripts/set_up_cam_coarse_res.py --caseroot /home/$USER/cam_output/caseroot/$CASE --reuse_build --silhs 4 repo'
	Running: '
repo/run_scripts/run_cesm_uwm_coarse_res.sh'
	Diffing: 'python3 repo/run_scripts/netcdf_3D_vars_diff.py 8cc633ec5c668b87b76afb3cbedac29732fdcc9d 0ab6cf98477cf6a49c01e346f9e733ebdf4f5605'

=============================== Test Results ===============================

Commit Range Checked = 0ab6cf98477cf6a49c01e346f9e733ebdf4f5605...8cc633ec5c668b87b76afb3cbedac29732fdcc9d

No new Unresolved commits found.

No fake BIT_CHANGING commits found.

No remaining Unresolved Commits.

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 

Saving into BaselineCommit: 8cc633ec5c668b87b76afb3cbedac29732fdcc9d

=============================== Cleanup ===============================

Removed repo.

Removing all generated output
	REMOVING: 0ab6cf98477cf6a49c01e346f9e733ebdf4f5605
	REMOVING: 8cc633ec5c668b87b76afb3cbedac29732fdcc9d

================== Unresolved Commit Status ==================

No remaining Unresolved Commits.

Exiting with code: 0
</span><span class="pipeline-new-node" nodeId="20" startId="18">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="21" startId="17">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="22" startId="22" enclosingId="11">[Pipeline] stage
</span><span class="pipeline-new-node" nodeId="23" startId="23" enclosingId="22" label="Declarative: Post Actions">[Pipeline] { (Declarative: Post Actions)
</span><span class="pipeline-new-node" nodeId="24" startId="24" enclosingId="23">[Pipeline] script
</span><span class="pipeline-new-node" nodeId="25" startId="25" enclosingId="24">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="26" enclosingId="25">[Pipeline] cleanWs
</span><span class="pipeline-node-26">[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
</span><span class="pipeline-new-node" nodeId="27" enclosingId="25">[Pipeline] sh
</span><span class="pipeline-node-27">+ chmod -R 755 /home/jenkins/cam_output
</span><span class="pipeline-new-node" nodeId="28" startId="25">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="29" startId="24">[Pipeline] // script
</span><span class="pipeline-new-node" nodeId="30" startId="23">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="31" startId="22">[Pipeline] // stage
</span><span class="pipeline-new-node" nodeId="32" startId="11">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="33" startId="10">[Pipeline] // withEnv
</span><span class="pipeline-new-node" nodeId="34" startId="4">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="35" startId="3">[Pipeline] // node
</span><span class="pipeline-new-node" nodeId="36" startId="2">[Pipeline] End of Pipeline
</span>Finished: SUCCESS